Factsheet for HORVU4Hr1G013190.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU1Hr1G049430.2
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G064710.1
HORVU3Hr1G079210.4
HORVU3Hr1G093580.1
HORVU4Hr1G026290.3
HORVU4Hr1G069780.1
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4
HORVU5Hr1G075810.1
HORVU5Hr1G123180.1
HORVU6Hr1G027660.9
HORVU6Hr1G076210.5
HORVU7Hr1G038980.5
HORVU7Hr1G053470.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27690.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT1G27690.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT1G27690.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT1G27690.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT1G27690.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT1G27690.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT1G27690.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT1G27690.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT1G27690.1	HORVU1Hr1G049430.2	AT3G07120.1	21798944
AT1G27690.1	HORVU3Hr1G064710.1	AT3G07120.1	21798944
AT1G27690.1	HORVU3Hr1G093580.1	AT3G07120.1	21798944
AT1G27690.1	HORVU4Hr1G069780.1	AT3G07120.1	21798944
AT1G27690.1	HORVU5Hr1G075810.1	AT3G07120.1	21798944
AT1G27690.1	HORVU5Hr1G123180.1	AT3G07120.1	21798944
AT1G27690.1	HORVU7Hr1G053470.4	AT3G07120.1	21798944
AT1G49840.1	HORVU6Hr1G027660.9	AT1G21840.1	21798944
AT3G19540.1	HORVU6Hr1G076210.5	AT5G62880.1	21798944
AT3G19540.1	HORVU7Hr1G038980.5	AT5G62880.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G076200.1	Wheat	cytosol, mitochondrion	76.83	84.9
TraesCS4A01G237300.1	Wheat	cytosol, mitochondrion	76.44	84.46
TraesCS4B01G077800.1	Wheat	cytosol	76.44	84.46
Os03t0606100-01	Rice	cytosol	69.7	80.0
HORVU5Hr1G018870.3	Barley	cytosol, mitochondrion	68.71	75.43
EER91248	Sorghum	cytosol	66.73	72.16
Zm00001d013746_P001	Maize	cytosol	64.95	70.84
GSMUA_Achr7P00620_001	Banana	mitochondrion	51.68	64.13
VIT_03s0091g00410.t01	Wine grape	plastid	60.0	63.79
KRG91072	Soybean	plastid	58.42	63.71
KRH35700	Soybean	plastid	58.22	63.64
PGSC0003DMT400066530	Potato	plastid	58.02	62.34
Solyc01g107350.2.1	Tomato	plastid	57.62	61.91
CDX95439	Canola	mitochondrion	52.87	61.38
CDY50147	Canola	mitochondrion	53.27	61.28
VIT_18s0001g09450.t01	Wine grape	plastid	56.63	60.98
CDY67693	Canola	mitochondrion	53.47	59.47
PGSC0003DMT400055468	Potato	plastid	55.05	59.15
KRH05611	Soybean	plastid	55.25	58.61
KRH15430	Soybean	plastid	54.85	58.56
CDY46168	Canola	mitochondrion	52.87	58.55
Bra038214.1-P	Field mustard	mitochondrion, plastid	53.07	58.39
Bra022430.1-P	Field mustard	mitochondrion, plastid	53.47	57.57
AT3G19540.1	Thale cress	plastid	54.85	57.11
CDY16530	Canola	plastid	50.89	56.86
CDY32838	Canola	plastid	51.09	56.7
CDY03939	Canola	cytosol	12.87	55.08
Bra014219.1-P	Field mustard	plastid	51.88	53.69
AT1G49840.1	Thale cress	plastid	52.48	53.64
AT1G27690.1	Thale cress	plastid	45.94	53.58
Solyc04g078190.2.1	Tomato	nucleus, plastid	28.32	48.81
CDY67976	Canola	mitochondrion, plastid	46.93	46.75
CDX90103	Canola	mitochondrion, plastid	46.73	46.55
Bra010924.1-P	Field mustard	mitochondrion, plastid	47.52	44.94
HORVU4Hr1G060590.5	Barley	mitochondrion	37.23	37.6
HORVU3Hr1G073950.2	Barley	plastid	30.5	35.65

Protein Annotations

EnsemblPlants:HORVU4Hr1G013190.8	EnsemblPlantsGene:HORVU4Hr1G013190	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF20	PFAM:PF04788
SEG:seg	UniParc:UPI000B483F5B	UniProt:A0A287N9I4	MapMan:27.4.5.3	:	:

Description

No Description!

Coordinates

chrchr4H:-:45137981..45140113

Molecular Weight (calculated)

55636.8 Da

IEP (calculated)

10.934

GRAVY (calculated)

-0.436

Length

505 amino acids

Sequence
(BLAST)

001: NARARTIFPA CIPSPGRARG THRLHPAPHL RINSETTAHT PSAAARSTQH SPHSGWQSFL PPPVCLWKGR RASSRRSSRR WRAGCRRRGR AGGPQRRPTS
101: TPRSGSPARG PAARCWRRSW RGPIRSPATG AGAARNDLRL LLGVMGAPLA PVHVCAAEPL PHLSIKDTPI ETSSAQYILQ QYLAASGGHK LLASVRNSYA
201: MGKVRMVATE FENAGRLVKN RNAARCAEPG RFVLWQMAPE KWYIELAVGG SKVHAGCNGK LVWRHTPWLG SHAAKGPVRP LRRALQGLDP LTAASMFAGA
301: RCIGERKVNG EDCFILKLCT DPETLKARTE GLAEIIRHVM FGYFSQRTGL LVHIEDSHLT RIQSTTGGDA VYWETTINSF IEDYRPVDGI MIAHSGRSAV
401: TLFRFGEVAM SHTKTRMEEA WSIEEVAFNV PGLSMDCFIP PTDIKSGSVS ETVELPHGEK NKFGPPHGHR AKVAALEKTD GDELAWRGTR EKQVEGGFRF
501: WKFEM

Best Arabidopsis Sequence Match ( AT3G19540.1 )
(BLAST)

001: MEKKQGFFSA LRHEVVRGLS PSRSRARSRS VSPARSSSPM SALTWGRKNL TGGGGGGGGG GYYLAQPEQL IGRSGSLRPV MEGPDPDEGG GGGNIGESKR
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV

Arabidopsis Description

AT3g19540/T31J18_4 [Source:UniProtKB/TrEMBL;Acc:Q9LH41]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.