Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G093200.1 | Wheat | cytosol, nucleus, plastid | 83.8 | 93.74 |
| TraesCS4B01G211300.1 | Wheat | cytosol, nucleus, plastid | 83.6 | 93.72 |
| TraesCS4D01G211900.1 | Wheat | cytosol, nucleus, plastid | 84.0 | 93.33 |
| EER95119 | Sorghum | cytosol | 79.6 | 89.84 |
| Os03t0267500-01 | Rice | plasma membrane | 77.2 | 87.53 |
| Zm00001d028565_P002 | Maize | cytosol | 80.2 | 87.17 |
| Zm00001d047840_P001 | Maize | cytosol, peroxisome, plastid | 75.4 | 82.86 |
| GSMUA_Achr5P28960_001 | Banana | cytosol | 58.2 | 66.74 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 50.4 | 66.49 |
| GSMUA_Achr6P33890_001 | Banana | cytosol | 47.8 | 62.4 |
| VIT_13s0019g03180.t01 | Wine grape | cytosol | 51.2 | 60.09 |
| Solyc03g078650.2.1 | Tomato | cytosol, nucleus, plastid | 48.8 | 58.1 |
| PGSC0003DMT400059652 | Potato | cytosol | 48.6 | 58.0 |
| PGSC0003DMT400069768 | Potato | cytosol | 23.2 | 57.71 |
| PGSC0003DMT400069765 | Potato | cytosol | 50.0 | 56.31 |
| AT5G05840.1 | Thale cress | cytosol | 49.2 | 56.04 |
| Solyc05g052860.2.1 | Tomato | cytosol | 49.4 | 55.76 |
| KRH15018 | Soybean | cytosol | 47.6 | 55.74 |
| KRH73113 | Soybean | cytosol | 47.2 | 55.66 |
| CDX70123 | Canola | cytosol | 49.0 | 55.3 |
| Bra009139.1-P | Field mustard | cytosol | 49.0 | 55.18 |
| KRH31070 | Soybean | cytosol | 48.0 | 55.05 |
| CDX98870 | Canola | cytosol | 48.8 | 54.95 |
| KRG97798 | Soybean | cytosol | 48.0 | 54.67 |
| HORVU3Hr1G073950.2 | Barley | plastid | 43.4 | 50.23 |
| Bra007185.1-P | Field mustard | cytosol, nucleus, plastid | 40.8 | 47.0 |
| CDY27272 | Canola | cytosol, nucleus, plastid | 40.8 | 47.0 |
| Bra014725.1-P | Field mustard | nucleus | 40.2 | 46.74 |
| AT3G55720.1 | Thale cress | nucleus | 40.6 | 46.35 |
| CDY02955 | Canola | cytosol, nucleus, plastid | 37.4 | 46.29 |
| CDX76076 | Canola | cytosol, nucleus, plastid | 37.2 | 46.04 |
| HORVU5Hr1G018870.3 | Barley | cytosol, mitochondrion | 38.4 | 41.74 |
| HORVU4Hr1G013190.8 | Barley | mitochondrion | 37.6 | 37.23 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G060590.5 | EnsemblPlantsGene:HORVU4Hr1G060590 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF2 | PFAM:PF04788 |
| SEG:seg | UniParc:UPI000B468938 | UniProt:A0A287PAM2 | MapMan:27.4.5.3 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:509002841..509006176
Molecular Weight (calculated)
54315.5 Da
IEP (calculated)
7.107
GRAVY (calculated)
-0.356
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: KRRDLLRSPS QTNIRTRAHT LGHRIASHPR SVVRVQAEEA EEIELWESAC VPPARPMRKL CPNLERDDAL DTVLEVPIPE EMFSGGGGGS RGSRFGCTSV
101: KAWMRSHAAD RSGAGEPCSM SRGELQLMLG VIGAPLIPLP VSHAKQSPSS VLCEQLKADP IESSSAKYIV QQYIAASGGE WALNKVTSMY AMGKVRMTAA
201: ELNSSDADGN GRGGGRKGGS KGGGEIGGFV LWQKKPELWC LELVVSGCKI SAGSDGKVAW RQTPWHQSHA SRGPPRPLRR SLQGLDPMLT ASLFAEDSVC
301: IGERSIDGED CFVLKVEAEA SSLRARNSSS VEIIRHTVWG YFSQRTGLLV QLEDSHLLQI KSGNGAGGSV FWETTMESRL RDYRAVDGVN IAHSGRTAVS
401: LVRFGDTQDG NTRTRMEEHW DIEEVDFNIW GLSMDCFLPP SDLRDAKESQ DQDVAVVKAA RPPPLRIPAV AVIRVGPSQV AAVNLDETES LLARIPTPHP
101: KAWMRSHAAD RSGAGEPCSM SRGELQLMLG VIGAPLIPLP VSHAKQSPSS VLCEQLKADP IESSSAKYIV QQYIAASGGE WALNKVTSMY AMGKVRMTAA
201: ELNSSDADGN GRGGGRKGGS KGGGEIGGFV LWQKKPELWC LELVVSGCKI SAGSDGKVAW RQTPWHQSHA SRGPPRPLRR SLQGLDPMLT ASLFAEDSVC
301: IGERSIDGED CFVLKVEAEA SSLRARNSSS VEIIRHTVWG YFSQRTGLLV QLEDSHLLQI KSGNGAGGSV FWETTMESRL RDYRAVDGVN IAHSGRTAVS
401: LVRFGDTQDG NTRTRMEEHW DIEEVDFNIW GLSMDCFLPP SDLRDAKESQ DQDVAVVKAA RPPPLRIPAV AVIRVGPSQV AAVNLDETES LLARIPTPHP
001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.