Factsheet for TraesCS4A01G093200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G211900.1	Wheat	cytosol, nucleus, plastid	98.21	97.56
TraesCS4B01G211300.1	Wheat	cytosol, nucleus, plastid	95.97	96.19
EER95119	Sorghum	cytosol	88.81	89.62
Os03t0267500-01	Rice	plasma membrane	86.58	87.76
Zm00001d028565_P002	Maize	cytosol	89.49	86.96
HORVU4Hr1G060590.5	Barley	mitochondrion	93.74	83.8
Zm00001d047840_P001	Maize	cytosol, peroxisome, plastid	83.89	82.42
GSMUA_Achr5P28960_001	Banana	cytosol	65.32	66.97
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	56.15	66.23
GSMUA_Achr6P33890_001	Banana	cytosol	53.91	62.92
VIT_13s0019g03180.t01	Wine grape	cytosol	57.94	60.8
Solyc03g078650.2.1	Tomato	cytosol, nucleus, plastid	55.03	58.57
PGSC0003DMT400059652	Potato	cytosol	54.81	58.47
PGSC0003DMT400069768	Potato	cytosol	25.73	57.21
KRH15018	Soybean	cytosol	53.69	56.21
KRH73113	Soybean	cytosol	53.24	56.13
PGSC0003DMT400069765	Potato	cytosol	55.7	56.08
AT5G05840.1	Thale cress	cytosol	55.03	56.04
Solyc05g052860.2.1	Tomato	cytosol	55.26	55.76
KRH31070	Soybean	cytosol	54.14	55.5
CDX70123	Canola	cytosol	54.81	55.3
TraesCS3A01G302500.1	Wheat	cytosol	47.43	55.21
Bra009139.1-P	Field mustard	cytosol	54.81	55.18
KRG97798	Soybean	cytosol	54.14	55.13
CDX98870	Canola	cytosol	54.59	54.95
TraesCS1A01G133000.1	Wheat	cytosol	50.78	50.22
CDY27272	Canola	cytosol, nucleus, plastid	45.86	47.23
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	45.86	47.23
Bra014725.1-P	Field mustard	nucleus	45.41	47.21
CDY02955	Canola	cytosol, nucleus, plastid	42.28	46.78
AT3G55720.1	Thale cress	nucleus	45.64	46.58
CDX76076	Canola	cytosol, nucleus, plastid	42.06	46.53
TraesCS4A01G237300.1	Wheat	cytosol, mitochondrion	43.85	42.89
TraesCS5A01G072300.1	Wheat	cytosol	43.18	41.68
TraesCS4A01G020600.1	Wheat	cytosol	31.54	38.42
TraesCS2A01G194900.1	Wheat	nucleus	42.51	37.4

Protein Annotations

EnsemblPlants:TraesCS4A01G093200.1	EnsemblPlantsGene:TraesCS4A01G093200	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF2	PFAM:PF04788
SEG:seg	MapMan:27.4.5.3	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:100666834..100669422

Molecular Weight (calculated)

47979.0 Da

IEP (calculated)

6.671

GRAVY (calculated)

-0.312

Length

447 amino acids

Sequence
(BLAST)

001: MRKLCPNLER DDALDTVLEV PIPEEMFSGG GGSSRGGSRF GCTGVKAWMR SHAADRSGAG EPCSMSRGEL QLMLGVIGAP LIPLPVSHAK QSPSSVLCEQ
101: LKGDPIESSS AKYIVQQYIA ASGGEWALNK VTSMYAMGKV RMTAAELNSS DADSGGSNNG GAHRGGKKGG GGKGGEIGGF VLWQKKPELW CLELVVSGCK
201: ISAGSDGKVA WRQTPWHQSH ASRGPPRPLR RSLQGLDPML TASLFAEDSV CIGERSIDGE DCFVLKVEAE ASSLRARNSS SVEIIRHTVW GYFSQRTGLL
301: VQLEDSHLLQ IKSGGPAGGG SVFWETTMES RLRDYRAVDG VNIAHSGRTA VSLVRFGDTH DGGNTRTRME EHWDIEEVDF NIWGLSMDCF LPPSDLRDAK
401: ESQQQELAVV KPARPPPLRI PAVAVVRVGP SQVAAVNLDE TESLLAR

Best Arabidopsis Sequence Match ( AT5G05840.1 )
(BLAST)

001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.