CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028565_P002	Maize	cytosol	96.61	93.04
Os03t0267500-01	Rice	plasma membrane	88.94	89.34
TraesCS4A01G093200.1	Wheat	cytosol, nucleus, plastid	89.62	88.81
TraesCS4B01G211300.1	Wheat	cytosol, nucleus, plastid	89.39	88.79
TraesCS4D01G211900.1	Wheat	cytosol, nucleus, plastid	90.07	88.67
HORVU4Hr1G060590.5	Barley	mitochondrion	89.84	79.6
GSMUA_Achr5P28960_001	Banana	cytosol	65.69	66.74
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	56.43	65.96
GSMUA_Achr6P33890_001	Banana	cytosol	54.4	62.92
VIT_13s0019g03180.t01	Wine grape	cytosol	58.24	60.56
PGSC0003DMT400059652	Potato	cytosol	55.3	58.47
Solyc03g078650.2.1	Tomato	cytosol, nucleus, plastid	55.3	58.33
PGSC0003DMT400069768	Potato	cytosol	26.41	58.21
KRH73113	Soybean	cytosol	54.18	56.6
PGSC0003DMT400069765	Potato	cytosol	56.66	56.53
KRH15018	Soybean	cytosol	53.95	55.97
Solyc05g052860.2.1	Tomato	cytosol	55.76	55.76
KRH31070	Soybean	cytosol	54.85	55.73
AT5G05840.1	Thale cress	cytosol	54.85	55.35
KRG97798	Soybean	cytosol	54.63	55.13
CDX70123	Canola	cytosol	54.63	54.63
Bra009139.1-P	Field mustard	cytosol	54.63	54.5
OQU89854	Sorghum	cytosol	47.18	54.43
CDX98870	Canola	cytosol	54.4	54.28
EES03659	Sorghum	cytosol	46.73	53.91
EES17962	Sorghum	cytosol, nucleus, plastid	51.69	48.21
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	44.24	45.16
CDY27272	Canola	cytosol, nucleus, plastid	44.24	45.16
Bra014725.1-P	Field mustard	nucleus	43.57	44.88
CDY02955	Canola	cytosol, nucleus, plastid	40.63	44.55
AT3G55720.1	Thale cress	nucleus	44.02	44.52
CDX76076	Canola	cytosol, nucleus, plastid	40.18	44.06
OQU79433	Sorghum	cytosol	42.21	41.65
EER91248	Sorghum	cytosol	43.34	41.11
EER95445	Sorghum	cytosol	32.96	39.78
OQU92347	Sorghum	mitochondrion, plastid	43.12	39.22
EER99634	Sorghum	nucleus	43.79	37.16

Protein Annotations

EnsemblPlants:EER95119	EnsemblPlantsGene:SORBI_3001G425300	EntrezGene:8085601	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF2
PFAM:PF04788	ProteinID:EER95119	ProteinID:EER95119.1	RefSeq:XP_002468121.1	SEG:seg	UniParc:UPI0001A83142
UniProt:C5WQ37	MapMan:27.4.5.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:70526724..70529971

Molecular Weight (calculated)

47546.4 Da

IEP (calculated)

6.251

GRAVY (calculated)

-0.281

Length

443 amino acids

Sequence
(BLAST)

001: MRKLCPNLER DDALDTVLEV PIPEEMFSGG GGGGGSRGSR FGCTAWMRSH AAERSGAGEP CSMSRGELQL MLGVIGAPLI PLPVYHAEQS PCSVLCEQLK
101: ADPIESSSAK YIVQQYIAAS GGEWALNKVK SMYAMGKVRM TAAELNSSDA DGHGGGITGN GHRGGKKGSK GSGGEIGGFV LWQKKPELWC LELVVSGCKI
201: SAGSDGKVAW RQTPWHQSHA SRGPPRPLRR SLQGLDPQLT ASLFADSVCI GERSIDGEDC FVLKVEAEAS SLRARNSSSV EIIRHTVWGY FSQRTGLLVQ
301: LEDSHLLQIR SSGGVGGSVF WETTMESRLG DYRAVDGVNI AHAGRTAVSL VRFGDCQDGN TRTRMEETWN IEEVDFNIWG LSMDCFLPPS DLREGKESQD
401: VAIGVKADAR PPPIRIPAVT VRVGPSQVAA VNMDDSDSLI ARS

Best Arabidopsis Sequence Match ( AT5G05840.1 )
(BLAST)

001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.