CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012676_P001	Maize	cytosol	97.4	97.91
OQU89854	Sorghum	cytosol	97.14	97.14
TraesCS3A01G302500.1	Wheat	cytosol	89.06	89.06
TraesCS3D01G299300.1	Wheat	cytosol	88.54	88.54
TraesCS3B01G333900.1	Wheat	cytosol	88.54	88.31
HORVU3Hr1G073950.2	Barley	plastid	88.02	78.24
GSMUA_Achr4P27870_001	Banana	cytosol	76.56	77.37
GSMUA_Achr2P13560_001	Banana	cytosol	71.35	72.68
VIT_18s0001g12320.t01	Wine grape	cytosol	58.85	60.75
VIT_04s0023g01510.t01	Wine grape	cytosol	56.25	59.5
AT5G66740.1	Thale cress	cytosol	54.69	56.76
CDY30758	Canola	cytosol	54.43	56.64
Bra012096.1-P	Field mustard	cytosol	54.43	56.64
CDY53851	Canola	cytosol	54.43	56.64
CDY49838	Canola	cytosol	53.91	56.1
CDY52160	Canola	cytosol	53.91	56.1
CDY68684	Canola	cytosol, mitochondrion	41.41	55.59
Bra023074.1-P	Field mustard	plastid	48.96	55.29
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	53.39	54.96
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	53.39	54.96
PGSC0003DMT400036213	Potato	cytosol	35.68	53.94
KRH76791	Soybean	cytosol	51.3	52.67
CDX68146	Canola	cytosol	51.82	52.65
KRH50361	Soybean	cytosol	52.34	52.62
KRH51867	Soybean	cytosol	52.34	52.62
Bra008179.1-P	Field mustard	cytosol	54.17	52.53
KRH05801	Soybean	cytosol	52.6	52.47
CDY37259	Canola	cytosol	53.91	52.27
CDY46011	Canola	cytosol	53.91	52.27
KRH28651	Soybean	cytosol	51.3	52.12
AT1G75160.1	Thale cress	cytosol	53.12	51.65
Bra003768.1-P	Field mustard	cytosol	52.34	50.76
PGSC0003DMT400013218	Potato	cytosol	50.52	50.13
Solyc07g022840.1.1	Tomato	cytosol	48.44	49.87
Solyc04g080220.2.1	Tomato	cytosol	49.22	48.84
EER95119	Sorghum	cytosol	53.91	46.73
EES17962	Sorghum	cytosol, nucleus, plastid	47.92	38.74
OQU79433	Sorghum	cytosol	41.67	35.63
EER95445	Sorghum	cytosol	33.07	34.6
EER91248	Sorghum	cytosol	40.36	33.19
OQU92347	Sorghum	mitochondrion, plastid	41.15	32.44
EER99634	Sorghum	nucleus	40.1	29.5
Bra031821.1-P	Field mustard	cytosol	53.39	27.37

Protein Annotations

EnsemblPlants:EES03659	EnsemblPlantsGene:SORBI_3003G305500	EntrezGene:8072110	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4
PFAM:PF04788	ProteinID:EES03659	ProteinID:EES03659.1	RefSeq:XP_002458539.1	SEG:seg	UniParc:UPI0001A84DE4
UniProt:C5XKV6	MapMan:27.4.5.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:63529430..63531284

Molecular Weight (calculated)

42448.4 Da

IEP (calculated)

7.457

GRAVY (calculated)

-0.309

Length

384 amino acids

Sequence
(BLAST)

001: MRKLCPNLDR DDSLDTVLEV PIPDEMLINA PGADKRRGAG GANMRAWLKN QAFDRATVDG AASATAELQL FLNVVGSPLI PCPVPHDRAF SRSIRDSSIQ
101: ASTAKYIIQQ YIAATGGQAA LQGVRSMYAV GKVRMCASEF HLGDQTVTTA AAQGRAEVGG FVLWHKTPEV WFFELIIAGH KMSAGSDGKV AWRQSAAEHS
201: HVSRGPPRPL RRSLQGLDPR SIANLFSDAV CIGEKILHNE ECFILKLEAG AATLRARSAP AFDIIHHTVW GYFSQRTGLL IQLEDSHLLR MKSGKGHRRS
301: ENIFWETSME SVISDYRYID GINIAHGGHT NVTLFRYGEG SVNHKRKLEE TWTVEEADFN VHGLTTDYFL PPADLKKDVE DQNK

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.