Factsheet for Bra031821.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52160	Canola	cytosol	48.2	97.83
Bra023074.1-P	Field mustard	plastid	42.06	92.65
Bra012096.1-P	Field mustard	cytosol	45.13	91.6
AT5G66740.1	Thale cress	cytosol	45.13	91.35
VIT_04s0023g01510.t01	Wine grape	cytosol	36.58	75.48
KRH76791	Soybean	cytosol	35.51	71.12
KRH28651	Soybean	cytosol	35.78	70.9
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	34.45	69.17
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	34.45	69.17
GSMUA_Achr4P27870_001	Banana	cytosol	29.77	58.68
GSMUA_Achr2P13560_001	Banana	cytosol	27.9	55.44
Zm00001d012676_P001	Maize	cytosol	27.77	54.45
TraesCS3A01G302500.1	Wheat	cytosol	27.9	54.43
TraesCS3B01G333900.1	Wheat	cytosol	27.9	54.29
TraesCS3D01G299300.1	Wheat	cytosol	27.77	54.17
OQU89854	Sorghum	cytosol	27.64	53.91
EES03659	Sorghum	cytosol	27.37	53.39
Bra003768.1-P	Field mustard	cytosol	27.64	52.27
Bra008179.1-P	Field mustard	cytosol	27.5	52.02
Zm00001d043364_P001	Maize	mitochondrion	8.01	49.59
HORVU3Hr1G073950.2	Barley	plastid	27.9	48.38
Bra009139.1-P	Field mustard	cytosol	26.03	43.92
Bra014725.1-P	Field mustard	nucleus	22.96	40.0
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	22.96	39.63
Bra038214.1-P	Field mustard	mitochondrion, plastid	21.76	35.51
Bra022430.1-P	Field mustard	mitochondrion, plastid	22.03	35.18
Bra035117.1-P	Field mustard	mitochondrion	18.42	33.09
Bra005901.1-P	Field mustard	cytosol	16.15	32.88
Bra014219.1-P	Field mustard	plastid	20.69	31.76
Bra010924.1-P	Field mustard	mitochondrion, plastid	20.43	28.65

Protein Annotations

EnsemblPlants:Bra031821.1	EnsemblPlants:Bra031821.1-P	EnsemblPlantsGene:Bra031821	Gene3D:3.50.50.60	InterPro:DUF620	InterPro:FAD-binding_2
InterPro:FAD/NAD-bd_sf	InterPro:IPR027477	InterPro:IPR036188	InterPro:Succ_DH/fumarate_Rdtase_cat_sf	PANTHER:PTHR31300	PANTHER:PTHR31300:SF9
PFAM:PF00890	PFAM:PF04788	SEG:seg	SUPFAM:SSF51905	SUPFAM:SSF56425	UniParc:UPI0002546CA8
UniProt:M4ESP1	MapMan:27.4.5.3	:	:	:	:

Description

AT5G66740 (E=4e-197) | unknown protein

Coordinates

chrA02:-:27727279..27734324

Molecular Weight (calculated)

83262.6 Da

IEP (calculated)

8.325

GRAVY (calculated)

-0.349

Length

749 amino acids

Sequence
(BLAST)

001: MRKLCPNVDR DDGLETVLEI LIPEELFSGM GNNVALMCQN MMTWMKAQTA DKLSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDSSIQAST
101: AKYIVQQYIA ATGGPAALNA VNSMCVIGQV KMTASEFHQG DDSNVNLKSN DEMGGFILWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPSSTG
201: TPRPLRRFLQ GLDPRSTANM FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPEFEII HHTIWGYFSQ RSGLLIQFED SRLLSMRTKE GDVFWETSAE
301: SVMDDYRYVD DVNIAHGGKT TVTVFRYGEA SANHRRQMTE KWRIEEVDFN IWGLSVGRPI VVPDRTGHAL LPTLYGQAMK HNTHFFVEYL ALDLLMASDG
401: SCQGVIALNM EDGTLHRFRS AQTILATGVG LWKSRAGPSI YEARSKSYYI KETNLESSQG VSDSESGDLK EYKEHADNFM EINYHPPPRR DSNTLTPSSS
501: FFIRCGILRN SEGERFMERY APTAKDLASR DVVSRSVTIE IREGRGVDAV VPGLMAAGEA ACASVHGASR LGANSLLDIL VFGRACANRV AEISKPGETL
601: EENAGKKIIE WLNKLRHSSG SLPTSSIRLN MQLSSAPKKH WKKRKHERKA EEHMLGRISR FDSTSSFNMH IYDLTPLSNN IMTRDGKRAH PQPNGPPRHG
701: LKFSRVTAGW PAAGCGIEKQ CPIPPRLVHR SLRVGPRVTI QKLNVSFDA

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.