Factsheet for GSMUA_Achr2P13560_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P27870_001	Banana	cytosol	85.41	84.74
TraesCS3A01G302500.1	Wheat	cytosol	74.27	72.92
Zm00001d043364_P001	Maize	mitochondrion	23.34	72.73
TraesCS3B01G333900.1	Wheat	cytosol	74.01	72.47
TraesCS3D01G299300.1	Wheat	cytosol	73.74	72.4
Zm00001d012676_P001	Maize	cytosol	73.21	72.25
OQU89854	Sorghum	cytosol	73.21	71.88
EES03659	Sorghum	cytosol	72.68	71.35
HORVU3Hr1G073950.2	Barley	plastid	74.01	64.58
VIT_04s0023g01510.t01	Wine grape	cytosol	59.95	62.26
VIT_18s0001g12320.t01	Wine grape	cytosol	60.74	61.56
AT5G66740.1	Thale cress	cytosol	58.62	59.73
CDY53851	Canola	cytosol	57.29	58.54
Bra012096.1-P	Field mustard	cytosol	57.29	58.54
CDY30758	Canola	cytosol	57.29	58.54
CDY49838	Canola	cytosol	56.23	57.45
CDY52160	Canola	cytosol	56.23	57.45
Bra023074.1-P	Field mustard	plastid	51.19	56.76
KRH76791	Soybean	cytosol	55.97	56.42
CDY68684	Canola	cytosol, mitochondrion	42.71	56.29
KRH28651	Soybean	cytosol	56.23	56.08
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	56.23	55.94
PGSC0003DMT400036213	Potato	cytosol	37.67	55.91
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	54.64	55.23
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	54.38	54.96
KRH50361	Soybean	cytosol	55.44	54.71
KRH05801	Soybean	cytosol	55.7	54.55
CDX68146	Canola	cytosol	54.64	54.5
KRH51867	Soybean	cytosol	55.17	54.45
PGSC0003DMT400013218	Potato	cytosol	55.17	53.75
AT1G75160.1	Thale cress	cytosol	56.23	53.67
Bra008179.1-P	Field mustard	cytosol	55.97	53.28
CDY37259	Canola	cytosol	55.7	53.03
CDY46011	Canola	cytosol	55.7	53.03
Solyc04g080220.2.1	Tomato	cytosol	54.38	52.97
Bra003768.1-P	Field mustard	cytosol	55.44	52.78
Solyc07g022840.1.1	Tomato	cytosol	51.72	52.28
GSMUA_Achr5P28960_001	Banana	cytosol	59.68	51.61
GSMUA_Achr6P33890_001	Banana	cytosol	50.4	49.61
GSMUA_Achr3P02230_001	Banana	cytosol, plastid	32.63	40.07
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	34.48	39.76
GSMUA_Achr4P32590_001	Banana	cytosol	46.42	38.72
GSMUA_Achr6P24020_001	Banana	cytosol	41.11	38.65
GSMUA_Achr3P29550_001	Banana	cytosol	35.81	37.92
GSMUA_Achr10P...	Banana	cytosol	38.99	37.79
GSMUA_Achr9P25120_001	Banana	mitochondrion	33.42	37.39
GSMUA_Achr4P14230_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	44.56	36.68
GSMUA_Achr7P00620_001	Banana	mitochondrion	39.26	36.36
GSMUA_Achr6P16820_001	Banana	cytosol	42.18	36.05
GSMUA_Achr10P...	Banana	plastid	38.99	35.08
GSMUA_Achr7P26350_001	Banana	cytosol, mitochondrion, peroxisome, plastid	42.97	33.75
GSMUA_Achr2P21540_001	Banana	plastid	38.73	33.41
GSMUA_Achr2P13470_001	Banana	cytosol	38.46	33.03
Bra031821.1-P	Field mustard	cytosol	55.44	27.9

Protein Annotations

EnsemblPlants:GSMUA_Achr2P13560_001	EnsemblPlants:GSMUA_Achr2T13560_001	EnsemblPlantsGene:GSMUA_Achr2G13560_001	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4
PFAM:PF04788	SEG:seg	UniParc:UPI0002949410	UniProt:M0S7P7	MapMan:27.4.5.3	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G13560_001]

Coordinates

chr2:-:15673917..15676057

Molecular Weight (calculated)

41822.0 Da

IEP (calculated)

7.206

GRAVY (calculated)

-0.259

Length

377 amino acids

Sequence
(BLAST)

001: MRKLCPNLDR EDGLDTVLEV PIPEEMFASA GTGAARWRNM RTWLEAQAFD KAAAPAQLSS RTVELQLLLN VVSSPLIPCP VPLDHPFNLS IQIRDCSIQA
101: STAKYIIQQY IAATGGQTAL ASVSSMYAVG KLQMSASEFH VGNQTVAAKR KGEIGGYVLW QKNPGVWYFE LIMAGSKMSA GSDGKVAWRQ SASEQSHASR
201: GPPRPLRRSL QGLDPRSTAT LFSDAVCIGE KVIDGEECFI LKLESNPATL RARSADTFDI IHHTIWGYFS QRTGLLVQLA DTHLLRMKAG RRGQSKSIFW
301: ETSMESAIRD YRYVDGVKIA HAGRTMVTLF RYGEGSVNHK RKMEETWTIE EVDFNLWGLS MECFLPPADL KEEEGGD

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.