CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03659	Sorghum	cytosol	97.14	97.14
TraesCS3A01G302500.1	Wheat	cytosol	90.1	90.1
TraesCS3D01G299300.1	Wheat	cytosol	89.58	89.58
TraesCS3B01G333900.1	Wheat	cytosol	89.58	89.35
Zm00001d043364_P001	Maize	mitochondrion	27.6	87.6
HORVU3Hr1G073950.2	Barley	plastid	88.54	78.7
GSMUA_Achr4P27870_001	Banana	cytosol	76.56	77.37
GSMUA_Achr2P13560_001	Banana	cytosol	71.88	73.21
VIT_18s0001g12320.t01	Wine grape	cytosol	58.85	60.75
VIT_04s0023g01510.t01	Wine grape	cytosol	56.77	60.06
AT5G66740.1	Thale cress	cytosol	55.47	57.57
CDY30758	Canola	cytosol	55.21	57.45
Bra012096.1-P	Field mustard	cytosol	55.21	57.45
CDY53851	Canola	cytosol	55.21	57.45
CDY52160	Canola	cytosol	54.43	56.64
CDY49838	Canola	cytosol	54.43	56.64
CDY68684	Canola	cytosol, mitochondrion	41.93	56.29
Bra023074.1-P	Field mustard	plastid	49.74	56.18
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	53.65	55.23
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	53.65	55.23
PGSC0003DMT400036213	Potato	cytosol	35.42	53.54
CDX68146	Canola	cytosol	52.34	53.17
Bra008179.1-P	Field mustard	cytosol	54.69	53.03
KRH05801	Soybean	cytosol	53.12	52.99
CDY37259	Canola	cytosol	54.43	52.78
CDY46011	Canola	cytosol	54.43	52.78
KRH76791	Soybean	cytosol	51.3	52.67
KRH50361	Soybean	cytosol	52.34	52.62
KRH51867	Soybean	cytosol	52.34	52.62
AT1G75160.1	Thale cress	cytosol	53.91	52.41
KRH28651	Soybean	cytosol	51.3	52.12
Bra003768.1-P	Field mustard	cytosol	52.86	51.26
PGSC0003DMT400013218	Potato	cytosol	50.26	49.87
Solyc07g022840.1.1	Tomato	cytosol	48.44	49.87
Solyc04g080220.2.1	Tomato	cytosol	48.96	48.58
EER95119	Sorghum	cytosol	54.43	47.18
EES17962	Sorghum	cytosol, nucleus, plastid	47.14	38.11
OQU79433	Sorghum	cytosol	42.19	36.08
EER95445	Sorghum	cytosol	33.85	35.42
EER91248	Sorghum	cytosol	40.89	33.62
OQU92347	Sorghum	mitochondrion, plastid	41.67	32.85
EER99634	Sorghum	nucleus	40.89	30.08
Bra031821.1-P	Field mustard	cytosol	53.91	27.64

Protein Annotations

EnsemblPlants:OQU89854	EnsemblPlantsGene:SORBI_3002G283200	EntrezGene:8063334	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4
PFAM:PF04788	ProteinID:OQU89854	ProteinID:OQU89854.1	RefSeq:XP_002460596.1	SEG:seg	UniParc:UPI0001A839FA
UniProt:A0A1W0W615	MapMan:27.4.5.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:66423908..66425315

Molecular Weight (calculated)

42288.3 Da

IEP (calculated)

7.388

GRAVY (calculated)

-0.313

Length

384 amino acids

Sequence
(BLAST)

001: MRKLCPNLDR DDSLDTVLEV PIPDEMLINA PGADKRRGAG GANMRAWLKN QAFDRATVDG AASATAELQL FLNVVGSPLI PCPVPHDRAF SRSIRDSSIQ
101: ASTAKYIIQQ YIAATGGQAA LQGVRSMYAV GKVRMCASEF HLGDQTVTTT AAQGRAEVGG FVLWQKTPEV WFFELIMGGH KMAAGSDGKV AWRQSAAEHS
201: HASRGPPRPL RRSLQGLDPR SIANLFSDAV CIGEKILNNE ECFILKLEAG AATLRARSAP AFDIIHHTVW GYFSQRTGLL IQLEDSHLLR MKSGKGHRRS
301: ENIFWETSME SVISDYRCID GVNIAHGGHT NVTLFRYGEG SVNHKRKLEE TWTVEEADFN VHGLTADYFL PPADLKKDVD DQNK

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.