Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G66740.1 | Thale cress | cytosol | 76.31 | 74.86 |
| CDY52160 | Canola | cytosol | 75.76 | 74.53 |
| Bra012096.1-P | Field mustard | cytosol | 75.48 | 74.25 |
| CDY30758 | Canola | cytosol | 75.48 | 74.25 |
| CDY49838 | Canola | cytosol | 75.48 | 74.25 |
| CDY53851 | Canola | cytosol | 75.48 | 74.25 |
| Bra023074.1-P | Field mustard | plastid | 68.59 | 73.24 |
| Solyc02g085490.1.1 | Tomato | cytosol, nucleus, peroxisome | 74.1 | 72.12 |
| PGSC0003DMT400038589 | Potato | cytosol, nucleus, peroxisome | 73.55 | 71.58 |
| KRH76791 | Soybean | cytosol | 72.18 | 70.05 |
| KRH28651 | Soybean | cytosol | 71.9 | 69.05 |
| VIT_18s0001g12320.t01 | Wine grape | cytosol | 64.74 | 63.17 |
| GSMUA_Achr4P27870_001 | Banana | cytosol | 64.46 | 61.58 |
| GSMUA_Achr2P13560_001 | Banana | cytosol | 62.26 | 59.95 |
| Zm00001d012676_P001 | Maize | cytosol | 60.33 | 57.33 |
| OQU89854 | Sorghum | cytosol | 60.06 | 56.77 |
| EES03659 | Sorghum | cytosol | 59.5 | 56.25 |
| TraesCS3A01G302500.1 | Wheat | cytosol | 59.23 | 55.99 |
| TraesCS3B01G333900.1 | Wheat | cytosol | 58.95 | 55.58 |
| TraesCS3D01G299300.1 | Wheat | cytosol | 58.68 | 55.47 |
| Zm00001d043364_P001 | Maize | mitochondrion | 17.63 | 52.89 |
| VIT_13s0019g03180.t01 | Wine grape | cytosol | 58.95 | 50.23 |
| HORVU3Hr1G073950.2 | Barley | plastid | 58.95 | 49.54 |
| VIT_19s0085g00900.t01 | Wine grape | mitochondrion | 40.77 | 38.14 |
| Bra031821.1-P | Field mustard | cytosol | 75.48 | 36.58 |
| VIT_03s0091g00410.t01 | Wine grape | plastid | 47.38 | 36.21 |
| VIT_18s0001g09450.t01 | Wine grape | plastid | 46.28 | 35.82 |
| VIT_08s0007g07110.t01 | Wine grape | cytosol | 35.81 | 19.7 |
Protein Annotations
| EntrezGene:100256475 | wikigene:100256475 | EntrezGene:104879139 | MapMan:27.4.5.3 | EMBL:AM450487 | ProteinID:CAN74294 |
| ProteinID:CAN74294.1 | ProteinID:CBI17541 | ProteinID:CBI17541.3 | UniProt:D7SPG2 | InterPro:DUF620 | EMBL:FN594959 |
| EntrezGene:LOC100256475 | wikigene:LOC100256475 | PFAM:PF04788 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF9 | UniParc:UPI00015CAFB4 |
| ArrayExpress:VIT_04s0023g01510 | EnsemblPlantsGene:VIT_04s0023g01510 | EnsemblPlants:VIT_04s0023g01510.t01 | RefSeq:XP_002271040 | RefSeq:XP_002271040.1 | RefSeq:XP_010649163.1 |
Description
No Description!
Coordinates
chr4:+:18049833..18052659
Molecular Weight (calculated)
41067.9 Da
IEP (calculated)
5.889
GRAVY (calculated)
-0.249
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLCPNFDR DDGLETVLEV PIPEEMFNSM GSNLALRCHN MLTWMKAQTA EKWSSPIIAG RFNELSFLLY IVGSPLIPLQ VRLDNSVHRP IRDSSIEAST
101: AKYIVQQYIA ATGGQPALSS VNSMCAIGQV RISASEFYQS DLHVKVGTTE EIGGFVLWQK NPDMWWLELV VSGCKVISGS NGKLSWRQCS NQQSPISKGA
201: PRPLRRFLQG LDPRSTANLF IDAVCIGEKI INNEDCFILK LETSRAVREA QSSPKFEIIH HTIWGYFSQR SGLLMQFEDS RLLRMNTEGD DGVFWETSSE
301: SVIEDYRYVD GVNIAHSGKT VVTVFRYGSH SASHKREMEE TWRIEEVDFN IWGLSNDFFL PPP
101: AKYIVQQYIA ATGGQPALSS VNSMCAIGQV RISASEFYQS DLHVKVGTTE EIGGFVLWQK NPDMWWLELV VSGCKVISGS NGKLSWRQCS NQQSPISKGA
201: PRPLRRFLQG LDPRSTANLF IDAVCIGEKI INNEDCFILK LETSRAVREA QSSPKFEIIH HTIWGYFSQR SGLLMQFEDS RLLRMNTEGD DGVFWETSSE
301: SVIEDYRYVD GVNIAHSGKT VVTVFRYGSH SASHKREMEE TWRIEEVDFN IWGLSNDFFL PPP
001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.