Factsheet for Zm00001d012676_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03659	Sorghum	cytosol	97.91	97.4
TraesCS3A01G302500.1	Wheat	cytosol	90.31	89.84
TraesCS3D01G299300.1	Wheat	cytosol	89.79	89.32
Zm00001d043364_P001	Maize	mitochondrion	28.27	89.26
TraesCS3B01G333900.1	Wheat	cytosol	89.79	89.09
HORVU3Hr1G073950.2	Barley	plastid	89.27	78.94
GSMUA_Achr4P27870_001	Banana	cytosol	77.75	78.16
GSMUA_Achr2P13560_001	Banana	cytosol	72.25	73.21
VIT_18s0001g12320.t01	Wine grape	cytosol	59.42	61.02
VIT_04s0023g01510.t01	Wine grape	cytosol	57.33	60.33
AT5G66740.1	Thale cress	cytosol	55.76	57.57
Bra012096.1-P	Field mustard	cytosol	55.5	57.45
CDY30758	Canola	cytosol	55.5	57.45
CDY53851	Canola	cytosol	55.5	57.45
CDY49838	Canola	cytosol	54.97	56.91
CDY52160	Canola	cytosol	54.97	56.91
CDY68684	Canola	cytosol, mitochondrion	42.15	56.29
Bra023074.1-P	Field mustard	plastid	50.0	56.18
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	54.19	55.5
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	54.19	55.5
PGSC0003DMT400036213	Potato	cytosol	36.13	54.33
KRH76791	Soybean	cytosol	52.36	53.48
CDX68146	Canola	cytosol	52.62	53.17
Bra008179.1-P	Field mustard	cytosol	54.97	53.03
KRH05801	Soybean	cytosol	53.4	52.99
KRH28651	Soybean	cytosol	52.36	52.91
KRH51867	Soybean	cytosol	52.88	52.88
KRH50361	Soybean	cytosol	52.88	52.88
CDY37259	Canola	cytosol	54.71	52.78
CDY46011	Canola	cytosol	54.71	52.78
AT1G75160.1	Thale cress	cytosol	53.93	52.15
Bra003768.1-P	Field mustard	cytosol	53.14	51.26
Solyc07g022840.1.1	Tomato	cytosol	48.95	50.13
PGSC0003DMT400013218	Potato	cytosol	50.79	50.13
Solyc04g080220.2.1	Tomato	cytosol	49.48	48.84
Zm00001d028565_P002	Maize	cytosol	55.24	45.87
Zm00001d047840_P001	Maize	cytosol, peroxisome, plastid	54.19	45.49
Zm00001d037792_P001	Maize	cytosol, nucleus, plastid	47.91	37.73
Zm00001d027816_P001	Maize	cytosol	32.98	34.9
Zm00001d030837_P001	Maize	cytosol, mitochondrion	42.41	33.89
Zm00001d013746_P001	Maize	cytosol	40.05	33.05
Zm00001d016585_P002	Maize	extracellular, plasma membrane	21.73	32.81
Zm00001d047324_P001	Maize	cytosol	41.36	32.24
Zm00001d006749_P001	Maize	cytosol	40.31	29.28
Zm00001d022006_P001	Maize	cytosol, plastid	40.58	27.83
Bra031821.1-P	Field mustard	cytosol	54.45	27.77

Protein Annotations

EnsemblPlants:Zm00001d012676_P001	EnsemblPlants:Zm00001d012676_T001	EnsemblPlantsGene:Zm00001d012676	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4
PFAM:PF04788	ProteinID:AQL00252.1	SEG:seg	UniParc:UPI00022078C4	UniProt:K7V4N8	MapMan:27.4.5.3

Description

No Description!

Coordinates

chr8:+:178444578..178446175

Molecular Weight (calculated)

42266.2 Da

IEP (calculated)

7.376

GRAVY (calculated)

-0.340

Length

382 amino acids

Sequence
(BLAST)

001: MRKLCPNLDR DDSLDTVLEV PIPDEMLINA PGADKRRGAG GANMRAWLKN QAFDRATVDG PASATAELQL FLNVVGSPLI PCPVPHDRAF SRSIRDSSIQ
101: ASTAKYIIQQ YIAATGGQAA LQGVRSMYAV GKVRMCASEF HLGDQTVTAA QGRAEVGGFV LWQKTPEVWF FELIMAGHKM SAGSDGKVAW RQSAAEHSRV
201: SRGPPRPLRR SLQGLDPRSI ANLFSDAVCI GEKILNNEEC FILKLEAGAA TLRARSAPAF DIIHHTVWGY FSQRTGLLIQ LEDSHLLRMK SGKGARRSEN
301: IFWETSMESV ISDYRYIDGI NIAHGGHTNV TLFRYGEGSV NHKRKLEETW TVEEADFNVH GLTTDYFLPP ADLKKDDEDH NK

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.