Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92347 | Sorghum | mitochondrion, plastid | 86.73 | 87.27 |
| Zm00001d006749_P001 | Maize | cytosol | 73.27 | 68.25 |
| KRG91072 | Soybean | plastid | 62.65 | 66.31 |
| Zm00001d022006_P001 | Maize | cytosol, plastid | 75.31 | 66.25 |
| KRH35700 | Soybean | plastid | 62.24 | 66.02 |
| VIT_03s0091g00410.t01 | Wine grape | plastid | 63.67 | 65.68 |
| PGSC0003DMT400066530 | Potato | plastid | 61.22 | 63.83 |
| Solyc01g107350.2.1 | Tomato | plastid | 61.02 | 63.62 |
| Zm00001d030837_P001 | Maize | cytosol, mitochondrion | 61.63 | 63.18 |
| Zm00001d013746_P001 | Maize | cytosol | 59.18 | 62.63 |
| PGSC0003DMT400055468 | Potato | plastid | 60.0 | 62.55 |
| VIT_18s0001g09450.t01 | Wine grape | plastid | 59.8 | 62.47 |
| CDY50147 | Canola | mitochondrion | 55.92 | 62.41 |
| KRH05611 | Soybean | plastid | 60.41 | 62.18 |
| KRH15430 | Soybean | plastid | 60.0 | 62.16 |
| CDX95439 | Canola | mitochondrion | 55.1 | 62.07 |
| CDY16530 | Canola | plastid | 55.71 | 60.4 |
| Bra038214.1-P | Field mustard | mitochondrion, plastid | 55.92 | 59.7 |
| Solyc04g078190.2.1 | Tomato | nucleus, plastid | 35.31 | 59.04 |
| CDY32838 | Canola | plastid | 54.69 | 58.9 |
| CDY67693 | Canola | mitochondrion | 54.29 | 58.59 |
| AT3G19540.1 | Thale cress | plastid | 57.96 | 58.56 |
| Zm00001d016585_P002 | Maize | extracellular, plasma membrane | 30.0 | 58.1 |
| CDY46168 | Canola | mitochondrion | 53.67 | 57.68 |
| Bra022430.1-P | Field mustard | mitochondrion, plastid | 55.1 | 57.57 |
| Bra014219.1-P | Field mustard | plastid | 56.73 | 56.97 |
| AT1G49840.1 | Thale cress | plastid | 56.53 | 56.07 |
| AT1G27690.1 | Thale cress | plastid | 48.16 | 54.5 |
| CDY03939 | Canola | cytosol | 12.65 | 52.54 |
| Zm00001d027816_P001 | Maize | cytosol | 34.49 | 46.81 |
| CDY67976 | Canola | mitochondrion, plastid | 47.55 | 45.96 |
| CDX90103 | Canola | mitochondrion, plastid | 47.55 | 45.96 |
| Zm00001d043364_P001 | Maize | mitochondrion | 11.22 | 45.45 |
| Bra010924.1-P | Field mustard | mitochondrion, plastid | 49.39 | 45.32 |
| Zm00001d012676_P001 | Maize | cytosol | 32.24 | 41.36 |
| Zm00001d047840_P001 | Maize | cytosol, peroxisome, plastid | 38.37 | 41.32 |
| Zm00001d028565_P002 | Maize | cytosol | 38.78 | 41.3 |
| Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 33.47 | 33.81 |
Protein Annotations
| EnsemblPlants:Zm00001d047324_P001 | EnsemblPlants:Zm00001d047324_T001 | EnsemblPlantsGene:Zm00001d047324 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF5 |
| PFAM:PF04788 | ProteinID:AQL06160.1 | SEG:seg | UniParc:UPI0001CAAF83 | UniProt:K7VHR0 | MapMan:27.4.5.3 |
Description
Lipase-like protein
Coordinates
chr9:+:126618556..126620556
Molecular Weight (calculated)
52660.7 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.236
Length
490 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKESKQGFF SALKGEVVRG LSPGRSRGKS LLLPRSRKTA AAEEVAPPEK LAQYAPDPLV THSGSLRLAG EVLAPLMEGP DVAEDDTFAE DSGRRDGFGQ
101: WVRGHLTRAP LIAGGGDGSF RRSDLRLLLG VMGAPLAPVS VSTAEPLPLA PVKGAPIESS SAQYILQQYL AASGGAKVLR SARNAYAMGK VRMVASEFET
201: ATRVVKNRGA AAAAAVEQGG FVLWRMSPDM WYVELAVGGS KVRAGCNGRL VWRHTPWLGA HAAKGPVRPL RRALQGLDPL STAGLFAEAR CVGEKKVGDE
301: ECFILKLSAD AETLRQRSEG PAEIIRHVVF GYFSQRTGLL VQVEDSHLTR IQPHAGGDAV YWETTISSFL EDYRAVDGVA IAHAGRSAVT LFRFGETAMS
401: HTKTRMEEAW TIQEAAFDVP GLSTDCFIPP ADVRRDSDSV GEPCELPPRG AKAGAVHPAC DAVHSRRRRD VAPADGELAT RSTGRWRCDF
101: WVRGHLTRAP LIAGGGDGSF RRSDLRLLLG VMGAPLAPVS VSTAEPLPLA PVKGAPIESS SAQYILQQYL AASGGAKVLR SARNAYAMGK VRMVASEFET
201: ATRVVKNRGA AAAAAVEQGG FVLWRMSPDM WYVELAVGGS KVRAGCNGRL VWRHTPWLGA HAAKGPVRPL RRALQGLDPL STAGLFAEAR CVGEKKVGDE
301: ECFILKLSAD AETLRQRSEG PAEIIRHVVF GYFSQRTGLL VQVEDSHLTR IQPHAGGDAV YWETTISSFL EDYRAVDGVA IAHAGRSAVT LFRFGETAMS
401: HTKTRMEEAW TIQEAAFDVP GLSTDCFIPP ADVRRDSDSV GEPCELPPRG AKAGAVHPAC DAVHSRRRRD VAPADGELAT RSTGRWRCDF
001: MEKKQGFFSA LRHEVVRGLS PSRSRARSRS VSPARSSSPM SALTWGRKNL TGGGGGGGGG GYYLAQPEQL IGRSGSLRPV MEGPDPDEGG GGGNIGESKR
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV
Arabidopsis Description
AT3g19540/T31J18_4 [Source:UniProtKB/TrEMBL;Acc:Q9LH41]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.