Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EER95119 | Sorghum | cytosol | 93.04 | 96.61 |
TraesCS4B01G211300.1 | Wheat | cytosol, nucleus, plastid | 86.96 | 89.69 |
TraesCS4A01G093200.1 | Wheat | cytosol, nucleus, plastid | 86.96 | 89.49 |
TraesCS4D01G211900.1 | Wheat | cytosol, nucleus, plastid | 87.39 | 89.33 |
Os03t0267500-01 | Rice | plasma membrane | 85.43 | 89.12 |
Zm00001d047840_P001 | Maize | cytosol, peroxisome, plastid | 84.78 | 85.71 |
HORVU4Hr1G060590.5 | Barley | mitochondrion | 87.17 | 80.2 |
GSMUA_Achr5P28960_001 | Banana | cytosol | 63.7 | 67.2 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 54.78 | 66.49 |
GSMUA_Achr6P33890_001 | Banana | cytosol | 52.83 | 63.45 |
VIT_13s0019g03180.t01 | Wine grape | cytosol | 56.52 | 61.03 |
Solyc03g078650.2.1 | Tomato | cytosol, nucleus, plastid | 53.91 | 59.05 |
PGSC0003DMT400059652 | Potato | cytosol | 53.7 | 58.95 |
PGSC0003DMT400069768 | Potato | cytosol | 25.43 | 58.21 |
PGSC0003DMT400069765 | Potato | cytosol | 55.0 | 56.98 |
KRH73113 | Soybean | cytosol | 52.39 | 56.84 |
Solyc05g052860.2.1 | Tomato | cytosol | 54.13 | 56.21 |
KRH15018 | Soybean | cytosol | 52.17 | 56.21 |
KRH31070 | Soybean | cytosol | 53.04 | 55.96 |
AT5G05840.1 | Thale cress | cytosol | 53.04 | 55.58 |
KRG97798 | Soybean | cytosol | 52.83 | 55.35 |
Zm00001d012676_P001 | Maize | cytosol | 45.87 | 55.24 |
CDX70123 | Canola | cytosol | 52.83 | 54.85 |
Bra009139.1-P | Field mustard | cytosol | 52.83 | 54.73 |
Zm00001d043364_P001 | Maize | mitochondrion | 14.35 | 54.55 |
CDX98870 | Canola | cytosol | 52.61 | 54.5 |
CDY27272 | Canola | cytosol, nucleus, plastid | 43.7 | 46.31 |
Bra007185.1-P | Field mustard | cytosol, nucleus, plastid | 43.7 | 46.31 |
Bra014725.1-P | Field mustard | nucleus | 43.04 | 46.05 |
AT3G55720.1 | Thale cress | nucleus | 43.7 | 45.89 |
CDY02955 | Canola | cytosol, nucleus, plastid | 40.22 | 45.79 |
CDX76076 | Canola | cytosol, nucleus, plastid | 39.78 | 45.3 |
Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 46.96 | 44.54 |
Zm00001d013746_P001 | Maize | cytosol | 41.09 | 40.82 |
Zm00001d027816_P001 | Maize | cytosol | 31.52 | 40.17 |
Zm00001d030837_P001 | Maize | cytosol, mitochondrion | 41.09 | 39.54 |
Zm00001d047324_P001 | Maize | cytosol | 41.3 | 38.78 |
Zm00001d016585_P002 | Maize | extracellular, plasma membrane | 20.43 | 37.15 |
Zm00001d006749_P001 | Maize | cytosol | 41.3 | 36.12 |
Zm00001d022006_P001 | Maize | cytosol, plastid | 43.04 | 35.55 |
Protein Annotations
EnsemblPlants:Zm00001d028565_P002 | EnsemblPlants:Zm00001d028565_T002 | EnsemblPlantsGene:Zm00001d028565 | EntrezGene:100279315 | InterPro:DUF620 | PANTHER:PTHR31300 |
PANTHER:PTHR31300:SF2 | PFAM:PF04788 | ProteinID:ONL96405.1 | SEG:seg | UniParc:UPI00084555D0 | UniProt:A0A1D6JXK1 |
MapMan:27.4.5.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:39236501..39239663
Molecular Weight (calculated)
49438.6 Da
IEP (calculated)
7.227
GRAVY (calculated)
-0.315
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLCPNLER DDALDTVLEV PIPEEMFSGG GGSRGSTRFG CTNVKAWMRS HAADRSGAGE PCSMTRGELQ LMLGVIGAPL IPLPVYHANQ SPCSVLCEQL
101: KADPIESSSA KYIVQQYIAA SGGEWALNKV KSMYAMGKVR MTAAELNSSD ADGHGGSTGN GHHRGGKKGS KGGGGGGEIG GFVLWQKKPE LWCLELVVSG
201: CKISAGSDGK VAWRQTPWHQ SHASRGPPRP LRRSLQVRSV RPASAAARFR GLDPQLTASL FADSVCIGER SIDGEDCFVL KVEAEASSLR ARNSSSVEII
301: RHTVWGYFSQ RTGLLVQLED SHLLQIRSSG GGAGGSVFWE TTMESRLGDY RAVDGVNIAH AGRTAVSLVR FGDCQDGNTR TRMEEEWNIE EVDFNIWGLS
401: MDCFLPPSDL REGKESQDVA VVKADARPPP LRIPAVTVRV GPSQVAAVNM DDSDSLVARS
101: KADPIESSSA KYIVQQYIAA SGGEWALNKV KSMYAMGKVR MTAAELNSSD ADGHGGSTGN GHHRGGKKGS KGGGGGGEIG GFVLWQKKPE LWCLELVVSG
201: CKISAGSDGK VAWRQTPWHQ SHASRGPPRP LRRSLQVRSV RPASAAARFR GLDPQLTASL FADSVCIGER SIDGEDCFVL KVEAEASSLR ARNSSSVEII
301: RHTVWGYFSQ RTGLLVQLED SHLLQIRSSG GGAGGSVFWE TTMESRLGDY RAVDGVNIAH AGRTAVSLVR FGDCQDGNTR TRMEEEWNIE EVDFNIWGLS
401: MDCFLPPSDL REGKESQDVA VVKADARPPP LRIPAVTVRV GPSQVAAVNM DDSDSLVARS
001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.