Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17962 | Sorghum | cytosol, nucleus, plastid | 76.91 | 78.53 |
| TraesCS1A01G133000.1 | Wheat | cytosol | 59.59 | 63.94 |
| TraesCS1D01G131900.1 | Wheat | cytosol | 59.38 | 63.3 |
| Os05t0252100-01 | Rice | cytosol | 62.27 | 61.89 |
| TraesCS1B01G151200.1 | Wheat | nucleus | 58.14 | 60.39 |
| Zm00001d043364_P001 | Maize | mitochondrion | 13.61 | 54.55 |
| Zm00001d047840_P001 | Maize | cytosol, peroxisome, plastid | 45.57 | 48.57 |
| Zm00001d012676_P001 | Maize | cytosol | 37.73 | 47.91 |
| Zm00001d028565_P002 | Maize | cytosol | 44.54 | 46.96 |
| Zm00001d027816_P001 | Maize | cytosol | 30.93 | 41.55 |
| Zm00001d030837_P001 | Maize | cytosol, mitochondrion | 36.49 | 37.03 |
| Zm00001d016585_P002 | Maize | extracellular, plasma membrane | 18.76 | 35.97 |
| Zm00001d013746_P001 | Maize | cytosol | 34.02 | 35.64 |
| Zm00001d047324_P001 | Maize | cytosol | 33.81 | 33.47 |
| Zm00001d006749_P001 | Maize | cytosol | 35.67 | 32.89 |
| Zm00001d022006_P001 | Maize | cytosol, plastid | 36.49 | 31.78 |
Protein Annotations
| EMBL:BT039324 | EnsemblPlants:Zm00001d037792_P001 | EnsemblPlants:Zm00001d037792_T001 | EnsemblPlantsGene:Zm00001d037792 | InterPro:DUF620 | PANTHER:PTHR31300 |
| PANTHER:PTHR31300:SF6 | PFAM:PF04788 | ProteinID:AQK84813.1 | SEG:seg | UniParc:UPI00017B7E64 | UniProt:B4FQD6 |
| MapMan:27.4.5.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:137882045..137884132
Molecular Weight (calculated)
52168.8 Da
IEP (calculated)
8.994
GRAVY (calculated)
-0.402
Length
485 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVCANPDR EVGLDTVLEV PVPDQLHHDP SSSSSGHGRR RRRTLKAWVR SRMDQRHRRH SSPPSQADVQ LMLGVVGAPL VPQPVQARKA MVAGEDIKEE
101: PLEVSKAKYI VEQYVAASGG ERALSAATSM YAVGKVLMRT RSSSTTTKQG QKARRTGMVG VVHGGAEIAG GLVLWQKGPE VWCVEMVVAG GTKMSAGSDG
201: RVAWRQTPWQ QAHASRGPPR PLRRCVQGLN PRSTANLFST ATWVGEKSVD GDDCFVLRVD ADPLALRARS GDDVEVVRHA VWGYFSQRTG LLSRLEDSHL
301: LRVRATKGSP LAQTTTYWET SMDSSIGDYR AVDGINVAHA GRTVVSLSRF GGSTNDDSAG SESAGVLGRR TCTCMEENWS IEEVDFNVVG LSAECFLPPR
401: DMVVVPCSPK PVDDEKGQCG RLDHSCKKDD APAALDVRNK NGNGGAGGVH RPATARKALV TAATGLPWSG TAKVVAVETF DTTAE
101: PLEVSKAKYI VEQYVAASGG ERALSAATSM YAVGKVLMRT RSSSTTTKQG QKARRTGMVG VVHGGAEIAG GLVLWQKGPE VWCVEMVVAG GTKMSAGSDG
201: RVAWRQTPWQ QAHASRGPPR PLRRCVQGLN PRSTANLFST ATWVGEKSVD GDDCFVLRVD ADPLALRARS GDDVEVVRHA VWGYFSQRTG LLSRLEDSHL
301: LRVRATKGSP LAQTTTYWET SMDSSIGDYR AVDGINVAHA GRTVVSLSRF GGSTNDDSAG SESAGVLGRR TCTCMEENWS IEEVDFNVVG LSAECFLPPR
401: DMVVVPCSPK PVDDEKGQCG RLDHSCKKDD APAALDVRNK NGNGGAGGVH RPATARKALV TAATGLPWSG TAKVVAVETF DTTAE
001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.