Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G133000.1 | Wheat | cytosol | 96.7 | 97.35 |
| TraesCS1B01G151200.1 | Wheat | nucleus | 94.07 | 91.65 |
| Os05t0252100-01 | Rice | cytosol | 68.57 | 63.93 |
| EES17962 | Sorghum | cytosol, nucleus, plastid | 66.37 | 63.58 |
| Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 63.3 | 59.38 |
| TraesCS4D01G211900.1 | Wheat | cytosol, nucleus, plastid | 50.33 | 50.89 |
| TraesCS3D01G299300.1 | Wheat | cytosol | 37.8 | 44.79 |
| TraesCS4D01G281900.1 | Wheat | cytosol | 33.63 | 41.92 |
| TraesCS5D01G085100.1 | Wheat | cytosol | 37.8 | 37.15 |
| TraesCS4D01G076200.1 | Wheat | cytosol, mitochondrion | 37.14 | 36.98 |
| TraesCS2D01G192800.1 | Wheat | nucleus | 37.8 | 33.99 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G131900.1 | EnsemblPlantsGene:TraesCS1D01G131900 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF6 | PFAM:PF04788 |
| SEG:seg | MapMan:27.4.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:155736047..155737549
Molecular Weight (calculated)
49408.9 Da
IEP (calculated)
8.231
GRAVY (calculated)
-0.388
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVCPNLDR EDGLDTVLEV PVPELHQEVP ARRRRTVNLK AWMRSHMHID HQHMHRRDGV QAMLGVMGAP LVPQPVQPRR PMGGRDSKEP LELSKARYIV
101: EQYVAAAGGE AALSAATSMF AMGKVRMSST TSKSSKATKK GMGEVHGGFV VWQKKPELWC VEMVVASGTK MSAGSDGKVA WRQTPWQQQA HASRGLPRPI
201: RRCVQGLDPK STADLFSSAA SVGEEAVDGV DCFVLRVDAE PSALHARSGA DVEVIRHALW GYFSQRTGLL VRLEDSHLLR IPRPADAASA SMYWETTMAS
301: TIGDYRPVDG INIAHAGRTV VSVSPFTRAA GAVDEADADA DARRKRPCTC MEETWSIEEV EFNIAGLSTE CFLPPRDLVL SDSKDQPRHN KEQGDKAAKG
401: ARDGDGGCGI RAAVPKKPLV PVVTGLGWFG PAKVAAVDTL DAADESKDTT YASTR
101: EQYVAAAGGE AALSAATSMF AMGKVRMSST TSKSSKATKK GMGEVHGGFV VWQKKPELWC VEMVVASGTK MSAGSDGKVA WRQTPWQQQA HASRGLPRPI
201: RRCVQGLDPK STADLFSSAA SVGEEAVDGV DCFVLRVDAE PSALHARSGA DVEVIRHALW GYFSQRTGLL VRLEDSHLLR IPRPADAASA SMYWETTMAS
301: TIGDYRPVDG INIAHAGRTV VSVSPFTRAA GAVDEADADA DARRKRPCTC MEETWSIEEV EFNIAGLSTE CFLPPRDLVL SDSKDQPRHN KEQGDKAAKG
401: ARDGDGGCGI RAAVPKKPLV PVVTGLGWFG PAKVAAVDTL DAADESKDTT YASTR
001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT1G75160]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.