Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G133000.1 | Wheat | cytosol | 63.52 | 68.58 |
| TraesCS1D01G131900.1 | Wheat | cytosol | 63.93 | 68.57 |
| EES17962 | Sorghum | cytosol, nucleus, plastid | 64.96 | 66.74 |
| TraesCS1B01G151200.1 | Wheat | nucleus | 63.32 | 66.17 |
| Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 61.89 | 62.27 |
| Os03t0267500-01 | Rice | plasma membrane | 47.75 | 52.83 |
| Os12t0581300-01 | Rice | cytosol | 15.16 | 46.84 |
| Os03t0167400-00 | Rice | cytosol | 31.97 | 42.62 |
| Os03t0606100-01 | Rice | cytosol | 35.25 | 39.09 |
| Os07t0591100-01 | Rice | nucleus | 38.32 | 36.1 |
| Os10t0411100-00 | Rice | cytosol, peroxisome, plasma membrane | 32.17 | 35.04 |
Protein Annotations
| EnsemblPlants:Os05t0252100-01 | EnsemblPlantsGene:Os05g0252100 | EntrezGene:4338225 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF6 |
| PFAM:PF04788 | ProteinID:BAF16947.1 | ProteinID:BAS93034.1 | RefSeq:XP_015638785.1 | SEG:seg | UniParc:UPI0000E123D7 |
| UniProt:Q0DJM6 | MapMan:27.4.5.3 | : | : | : | : |
Description
Protein of unknown function DUF620 family protein. (Os05t0252100-01)
Coordinates
chr5:-:9232257..9234349
Molecular Weight (calculated)
51397.9 Da
IEP (calculated)
6.937
GRAVY (calculated)
-0.231
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVCPNLDR EDGLDTVLEV PVPELHRQAP RRRGRRGGGG TVKSWVRARM EHGRRRDGAA PSRAEVQLML GVVGAPLVPQ AVEARKAMVA GRGVGGEGEE
101: PLDLEASKAR YIVEQYVAAA GGEAALGAAT SMYAMGKVRM RTTTTSKANK GKVMGVAAGG EVAGGFVVWQ KKPDLWCVEM VVAGGVKMSA GSDGKVAWRQ
201: TPWQEAHASR GPPRPLRRCI QGLDPKSTAD LFSSAAWVGE RCVDGDDCFV LRVDADHAAL RARSSGDVEV VRHAVLGYFS QRTGLLVRLE DSHLLRIGLA
301: HAAAESAYWE TTMESSIGDY RAVDGINIAH AGRTAVSLSR FESADDAAAA ARGSNKRSWG TTTMEETWSI EEVDFNVVGL SMDCFLPPRD LVLNDCSKQQ
401: QKEDAAAAVV VKDAAAAVDV KDAAGAAANA KGGSDDGKTN GGDVGRGVVV KKALVPAVTG LGWFGPAKVV AVDDTVDDGV AAAADDDK
101: PLDLEASKAR YIVEQYVAAA GGEAALGAAT SMYAMGKVRM RTTTTSKANK GKVMGVAAGG EVAGGFVVWQ KKPDLWCVEM VVAGGVKMSA GSDGKVAWRQ
201: TPWQEAHASR GPPRPLRRCI QGLDPKSTAD LFSSAAWVGE RCVDGDDCFV LRVDADHAAL RARSSGDVEV VRHAVLGYFS QRTGLLVRLE DSHLLRIGLA
301: HAAAESAYWE TTMESSIGDY RAVDGINIAH AGRTAVSLSR FESADDAAAA ARGSNKRSWG TTTMEETWSI EEVDFNVVGL SMDCFLPPRD LVLNDCSKQQ
401: QKEDAAAAVV VKDAAAAVDV KDAAGAAANA KGGSDDGKTN GGDVGRGVVV KKALVPAVTG LGWFGPAKVV AVDDTVDDGV AAAADDDK
001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.