Factsheet for Os03t0167400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027816_P001	Maize	cytosol	87.98	89.2
EER95445	Sorghum	cytosol	89.34	89.1
TraesCS4A01G020600.1	Wheat	cytosol	87.43	87.19
TraesCS4D01G281900.1	Wheat	cytosol	86.61	86.85
TraesCS4B01G282900.1	Wheat	cytosol	86.61	86.85
GSMUA_Achr3P29550_001	Banana	cytosol	60.38	62.08
Os10t0411100-00	Rice	cytosol, peroxisome, plasma membrane	74.04	60.49
KRG96347	Soybean	cytosol	47.81	49.58
Solyc03g051920.2.1	Tomato	cytosol	47.54	49.29
PGSC0003DMT400066079	Potato	cytosol	47.27	49.15
KRH71794	Soybean	cytosol	48.36	48.9
KRH68081	Soybean	cytosol	47.54	48.74
KRH38019	Soybean	peroxisome	46.45	47.09
CDX81011	Canola	cytosol	45.08	44.84
CDY55767	Canola	cytosol	45.08	44.84
Bra005901.1-P	Field mustard	cytosol	44.81	44.57
AT5G06610.1	Thale cress	cytosol	44.54	44.29
Os12t0581300-01	Rice	cytosol	18.58	43.04
Os03t0606100-01	Rice	cytosol	45.36	37.73
Os07t0591100-01	Rice	nucleus	46.99	33.2
Os03t0267500-01	Rice	plasma membrane	39.07	32.43
Os05t0252100-01	Rice	cytosol	42.62	31.97
VIT_08s0007g07110.t01	Wine grape	cytosol	49.73	27.58

Protein Annotations

EnsemblPlants:Os03t0167400-00	EnsemblPlantsGene:Os03g0167400	EntrezGene:4331744	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF3
PFAM:PF04788	ProteinID:BAF10995.1	ProteinID:BAS82484.1	RefSeq:XP_015632494.1	SEG:seg	UniParc:UPI0000E11F3F
UniProt:Q0DUU3	MapMan:27.4.5.3	:	:	:	:

Description

Protein of unknown function DUF620 family protein. (Os03t0167400-00)

Coordinates

chr3:+:3638615..3642337

Molecular Weight (calculated)

38619.1 Da

IEP (calculated)

9.207

GRAVY (calculated)

-0.078

Length

366 amino acids

Sequence
(BLAST)

001: MRSRVALETL AEEPGGGEEE AARRKSSGLQ AALHRVARRL LSGAGEDARP AADLRVLLSV LACPLSPVPI LPRLPRHVAS SAQYIIEQFR ATTGCGKIEG
101: AVKSMYAAGR VRLAMLQDPA GGGAGGGGGG GRGHEGSFVM WQLAPSMWIV EMAVAGQHVA AGSDGRVAWR RTPWVGAHAA RGGSRPLRRA LQGLDPVTIA
201: AIFSTAEHAG EKLVDGEDCF VLRLDVGPSV LSSWSDGTAE VIRHGLTGFF SQRSGLLVRL EDSQLTRIQS PGAAAMYWET TISSSLADYR AVDGGGGVHV
301: AHSGRSTAHL ARFGVGVRAA RVVTRMEESW TIDDVAFNVP GLGPDAFIPP EEVRRSRFYD AMAAGK

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.