CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38019	Soybean	peroxisome	94.48	94.74
KRH68081	Soybean	cytosol	75.97	77.03
KRG96347	Soybean	cytosol	74.86	76.77
PGSC0003DMT400066079	Potato	cytosol	67.4	69.32
Solyc03g051920.2.1	Tomato	cytosol	67.4	69.12
CDX81011	Canola	cytosol	61.88	60.87
CDY55767	Canola	cytosol	61.88	60.87
Bra005901.1-P	Field mustard	cytosol	61.6	60.6
AT5G06610.1	Thale cress	cytosol	61.05	60.05
GSMUA_Achr3P29550_001	Banana	cytosol	54.7	55.62
Zm00001d027816_P001	Maize	cytosol	49.17	49.31
EER95445	Sorghum	cytosol	49.45	48.77
Os03t0167400-00	Rice	cytosol	48.9	48.36
TraesCS4B01G282900.1	Wheat	cytosol	48.62	48.22
TraesCS4D01G281900.1	Wheat	cytosol	48.62	48.22
TraesCS4A01G020600.1	Wheat	cytosol	48.62	47.96
KRH13789	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	47.24	44.53
KRH43665	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	47.24	44.42
VIT_08s0007g07110.t01	Wine grape	cytosol	75.97	41.67
Os10t0411100-00	Rice	cytosol, peroxisome, plasma membrane	46.96	37.95
KRH05611	Soybean	plastid	48.62	36.97
KRH15430	Soybean	plastid	48.07	36.79
KRH35700	Soybean	plastid	46.69	36.58
KRG91072	Soybean	plastid	46.69	36.5
KRH28651	Soybean	cytosol	34.53	33.07
KRH50361	Soybean	cytosol	34.81	32.98
KRH51867	Soybean	cytosol	34.25	32.46
KRH76791	Soybean	cytosol	33.43	32.35
KRH31070	Soybean	cytosol	38.4	31.88
KRH73113	Soybean	cytosol	37.29	31.84
KRG97798	Soybean	cytosol	38.4	31.66
KRH05801	Soybean	cytosol	33.43	31.43
KRH15018	Soybean	cytosol	37.02	31.38

Protein Annotations

EMBL:ACUP02001071	EnsemblPlants:KRH71794	EnsemblPlantsGene:GLYMA_02G169000	EntrezGene:100801654	InterPro:DUF620	PANTHER:PTHR31300
PANTHER:PTHR31300:SF3	PFAM:PF04788	ProteinID:KRH71792.1	ProteinID:KRH71793.1	ProteinID:KRH71794	ProteinID:KRH71794.1
SEG:seg	UniParc:UPI000295297F	UniProt:K7K8X0	MapMan:27.4.5.3	:	:

Description

hypothetical protein

Coordinates

chr2:+:26098818..26101938

Molecular Weight (calculated)

40180.2 Da

IEP (calculated)

6.311

GRAVY (calculated)

-0.147

Length

362 amino acids

Sequence
(BLAST)

001: MMGRLAPLSE EPINEENEGY NNSNSKKCLQ SWRNWNWIKT HFSLAFNKKS NLKILLSVLG CPLFPVPVHP ILPLNEVSSS AQYIIQHFRA ATGCRKLEGT
101: VKNVFTTGKV TMDVVDELGS TSGGINLEKG CFVMWQMVPD KWQIELVLGG QKVVAGSNGA IAWRHTPWLG VHAAKGGVRP LRRALQGLDP LAVSAVFCAA
201: QYMGEKEISG MDCFVLKLSA DQKDLVERSD NTAEMIKHAI FGYFSQRSGL LVYLEDSYLT RIQAPGSHPT YWETTMSTKI EDYRIVDGVM IAHAGSSTAL
301: ITRFGDNLKA GPSITRLEES WTIDDVAFNV PGLSLDCFIP PQELQRDCSS DDELDWRSFT LA

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.