Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005901.1-P | Field mustard | cytosol | 84.78 | 84.78 |
| CDX81011 | Canola | cytosol | 84.78 | 84.78 |
| CDY55767 | Canola | cytosol | 84.78 | 84.78 |
| KRG96347 | Soybean | cytosol | 59.78 | 62.32 |
| KRH68081 | Soybean | cytosol | 59.78 | 61.62 |
| KRH38019 | Soybean | peroxisome | 60.33 | 61.5 |
| KRH71794 | Soybean | cytosol | 60.05 | 61.05 |
| PGSC0003DMT400066079 | Potato | cytosol | 56.52 | 59.09 |
| Solyc03g051920.2.1 | Tomato | cytosol | 56.52 | 58.92 |
| GSMUA_Achr3P29550_001 | Banana | cytosol | 50.0 | 51.69 |
| Zm00001d027816_P001 | Maize | cytosol | 45.65 | 46.54 |
| EER95445 | Sorghum | cytosol | 46.2 | 46.32 |
| TraesCS4D01G281900.1 | Wheat | cytosol | 45.38 | 45.75 |
| TraesCS4A01G020600.1 | Wheat | cytosol | 45.38 | 45.5 |
| TraesCS4B01G282900.1 | Wheat | cytosol | 45.11 | 45.48 |
| Os03t0167400-00 | Rice | cytosol | 44.29 | 44.54 |
| AT1G79420.1 | Thale cress | mitochondrion | 44.02 | 38.85 |
| AT1G27690.1 | Thale cress | plastid | 45.11 | 38.34 |
| Os10t0411100-00 | Rice | cytosol, peroxisome, plasma membrane | 44.57 | 36.61 |
| AT5G66740.1 | Thale cress | cytosol | 36.41 | 36.22 |
| AT3G19540.1 | Thale cress | plastid | 45.11 | 34.23 |
| VIT_08s0007g07110.t01 | Wine grape | cytosol | 59.24 | 33.03 |
| AT1G49840.1 | Thale cress | plastid | 43.48 | 32.39 |
| AT5G05840.1 | Thale cress | cytosol | 36.96 | 30.98 |
| AT1G75160.1 | Thale cress | cytosol | 31.52 | 29.37 |
| AT3G55720.1 | Thale cress | nucleus | 32.88 | 27.63 |
Protein Annotations
| MapMan:27.4.5.3 | EntrezGene:830549 | ProteinID:AED91042.1 | EMBL:AF370524 | ArrayExpress:AT5G06610 | EnsemblPlantsGene:AT5G06610 |
| RefSeq:AT5G06610 | TAIR:AT5G06610 | RefSeq:AT5G06610-TAIR-G | EnsemblPlants:AT5G06610.1 | TAIR:AT5G06610.1 | EMBL:AY081470 |
| Unigene:At.9068 | ProteinID:BAB11410.1 | InterPro:DUF620 | RefSeq:NP_196279.1 | PFAM:PF04788 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31300 | PANTHER:PTHR31300:SF3 | UniProt:Q9FG09 | UniParc:UPI000009F92F | SEG:seg | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
Coordinates
chr5:+:2029793..2033723
Molecular Weight (calculated)
40938.3 Da
IEP (calculated)
7.206
GRAVY (calculated)
-0.238
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.