Factsheet for AT1G75160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46011	Canola	cytosol	94.94	94.7
CDY37259	Canola	cytosol	94.94	94.7
Bra008179.1-P	Field mustard	cytosol	94.94	94.7
Bra003768.1-P	Field mustard	cytosol	93.92	93.69
CDX68146	Canola	cytosol	89.37	93.39
CDY68684	Canola	cytosol, mitochondrion	66.84	92.31
VIT_18s0001g12320.t01	Wine grape	cytosol	63.29	67.2
KRH05801	Soybean	cytosol	61.52	63.12
KRH51867	Soybean	cytosol	60.25	62.3
KRH50361	Soybean	cytosol	60.0	62.04
PGSC0003DMT400036213	Potato	cytosol	37.47	58.27
AT5G66740.1	Thale cress	cytosol	54.43	58.11
PGSC0003DMT400013218	Potato	cytosol	55.19	56.33
GSMUA_Achr2P13560_001	Banana	cytosol	53.67	56.23
Zm00001d043364_P001	Maize	mitochondrion	17.22	56.2
Solyc04g080220.2.1	Tomato	cytosol	54.68	55.81
GSMUA_Achr4P27870_001	Banana	cytosol	53.67	55.79
Solyc07g022840.1.1	Tomato	cytosol	52.41	55.5
Zm00001d012676_P001	Maize	cytosol	52.15	53.93
OQU89854	Sorghum	cytosol	52.41	53.91
EES03659	Sorghum	cytosol	51.65	53.12
TraesCS3B01G333900.1	Wheat	cytosol	51.65	52.99
TraesCS3A01G302500.1	Wheat	cytosol	51.39	52.86
TraesCS3D01G299300.1	Wheat	cytosol	51.39	52.86
HORVU3Hr1G073950.2	Barley	plastid	50.63	46.3
AT5G05840.1	Thale cress	cytosol	50.38	45.33
AT3G55720.1	Thale cress	nucleus	45.82	41.32
AT1G27690.1	Thale cress	plastid	36.96	33.72
AT1G79420.1	Thale cress	mitochondrion	35.19	33.33
AT3G19540.1	Thale cress	plastid	39.75	32.37
AT5G06610.1	Thale cress	cytosol	29.37	31.52
AT1G49840.1	Thale cress	plastid	37.72	30.16

Protein Annotations

MapMan:27.4.5.3	EntrezGene:843853	ProteinID:AEE35678.1	ArrayExpress:AT1G75160	EnsemblPlantsGene:AT1G75160	RefSeq:AT1G75160
TAIR:AT1G75160	RefSeq:AT1G75160-TAIR-G	EnsemblPlants:AT1G75160.1	TAIR:AT1G75160.1	Unigene:At.34808	InterPro:DUF620
UniProt:F4HXG1	RefSeq:NP_177652.2	PFAM:PF04788	PO:PO:0001016	PO:PO:0001017	PO:PO:0007611
PO:PO:0007616	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4	UniParc:UPI000019719C	SEG:seg	:

Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT1G75160]

Coordinates

chr1:+:28209407..28211826

Molecular Weight (calculated)

43600.2 Da

IEP (calculated)

6.838

GRAVY (calculated)

-0.203

Length

395 amino acids

Sequence
(BLAST)

001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.