Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G299300.1 | Wheat | cytosol | 98.7 | 98.96 |
| TraesCS3A01G302500.1 | Wheat | cytosol | 98.44 | 98.7 |
| Zm00001d012676_P001 | Maize | cytosol | 89.09 | 89.79 |
| OQU89854 | Sorghum | cytosol | 89.35 | 89.58 |
| EES03659 | Sorghum | cytosol | 88.31 | 88.54 |
| HORVU3Hr1G073950.2 | Barley | plastid | 96.1 | 85.65 |
| Zm00001d043364_P001 | Maize | mitochondrion | 26.49 | 84.3 |
| GSMUA_Achr4P27870_001 | Banana | cytosol | 77.66 | 78.68 |
| GSMUA_Achr2P13560_001 | Banana | cytosol | 72.47 | 74.01 |
| VIT_18s0001g12320.t01 | Wine grape | cytosol | 58.96 | 61.02 |
| VIT_04s0023g01510.t01 | Wine grape | cytosol | 55.58 | 58.95 |
| AT5G66740.1 | Thale cress | cytosol | 55.58 | 57.84 |
| CDY53851 | Canola | cytosol | 55.06 | 57.45 |
| Bra012096.1-P | Field mustard | cytosol | 55.06 | 57.45 |
| CDY30758 | Canola | cytosol | 55.06 | 57.45 |
| CDY49838 | Canola | cytosol | 54.55 | 56.91 |
| CDY52160 | Canola | cytosol | 54.55 | 56.91 |
| CDY68684 | Canola | cytosol, mitochondrion | 42.08 | 56.64 |
| Bra023074.1-P | Field mustard | plastid | 49.61 | 56.18 |
| PGSC0003DMT400038589 | Potato | cytosol, nucleus, peroxisome | 54.29 | 56.03 |
| Solyc02g085490.1.1 | Tomato | cytosol, nucleus, peroxisome | 54.03 | 55.76 |
| PGSC0003DMT400036213 | Potato | cytosol | 36.36 | 55.12 |
| KRH05801 | Soybean | cytosol | 53.51 | 53.51 |
| CDX68146 | Canola | cytosol | 52.47 | 53.44 |
| KRH50361 | Soybean | cytosol | 52.99 | 53.4 |
| KRH51867 | Soybean | cytosol | 52.99 | 53.4 |
| KRH76791 | Soybean | cytosol | 50.91 | 52.41 |
| KRH28651 | Soybean | cytosol | 51.17 | 52.12 |
| Bra008179.1-P | Field mustard | cytosol | 53.51 | 52.02 |
| CDY46011 | Canola | cytosol | 53.25 | 51.77 |
| CDY37259 | Canola | cytosol | 53.25 | 51.77 |
| AT1G75160.1 | Thale cress | cytosol | 52.99 | 51.65 |
| Bra003768.1-P | Field mustard | cytosol | 52.99 | 51.52 |
| Solyc07g022840.1.1 | Tomato | cytosol | 49.35 | 50.94 |
| PGSC0003DMT400013218 | Potato | cytosol | 50.39 | 50.13 |
| Solyc04g080220.2.1 | Tomato | cytosol | 49.09 | 48.84 |
| TraesCS4B01G211300.1 | Wheat | cytosol, nucleus, plastid | 55.06 | 47.53 |
| TraesCS1B01G151200.1 | Wheat | nucleus | 45.19 | 37.26 |
| TraesCS4B01G077800.1 | Wheat | cytosol | 42.34 | 35.67 |
| TraesCS5B01G078600.2 | Wheat | cytosol | 38.44 | 34.42 |
| TraesCS4B01G282900.1 | Wheat | cytosol | 32.21 | 33.97 |
| TraesCS2B01G211900.1 | Wheat | nucleus | 40.52 | 30.65 |
| Bra031821.1-P | Field mustard | cytosol | 54.29 | 27.9 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G333900.1 | EnsemblPlantsGene:TraesCS3B01G333900 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF4 | PFAM:PF04788 |
| SEG:seg | MapMan:27.4.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:540454800..540456148
Molecular Weight (calculated)
42232.2 Da
IEP (calculated)
7.606
GRAVY (calculated)
-0.370
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLCPNHDR DDSQLDTVLE VPIPDEMLAN APGADKRRGG GPNMRAWLKT QAFDRATAEG PAAAAANAEL QLFLNVVGSP LIPCPVPHDR AFSRSIRDSS
101: IQASTAKYIM QQYIAATGGQ AALQGVQSMY AVGKVKMCAS EFHLGDQTVT AAQGRAEVGG FVLWQKCPEV WYFELIMAGH KMSAGSDGKV AWRQSAAENS
201: HASRGPPRPL RRSLQGLDPR SIANLFSDAV CIGEKVINGE ECFILKLEAS AMTLRARSAA AFDIIHHTVW GYFSQRTGLL IQLEDNHLLR MKSGKGARRS
301: ENIFWETSME SVINNYRHID GVNIAHGGKT TVTLFRYGEG SVNHKRKLEE TWTVEEADFN VKGLTSDYFL PPSDLKKEGD DQPGG
101: IQASTAKYIM QQYIAATGGQ AALQGVQSMY AVGKVKMCAS EFHLGDQTVT AAQGRAEVGG FVLWQKCPEV WYFELIMAGH KMSAGSDGKV AWRQSAAENS
201: HASRGPPRPL RRSLQGLDPR SIANLFSDAV CIGEKVINGE ECFILKLEAS AMTLRARSAA AFDIIHHTVW GYFSQRTGLL IQLEDNHLLR MKSGKGARRS
301: ENIFWETSME SVINNYRHID GVNIAHGGKT TVTLFRYGEG SVNHKRKLEE TWTVEEADFN VKGLTSDYFL PPSDLKKEGD DQPGG
001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.