Factsheet for Bra012096.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53851	Canola	cytosol	99.73	99.73
Bra023074.1-P	Field mustard	plastid	91.87	99.71
CDY30758	Canola	cytosol	99.46	99.46
AT5G66740.1	Thale cress	cytosol	96.21	95.95
VIT_04s0023g01510.t01	Wine grape	cytosol	74.25	75.48
KRH28651	Soybean	cytosol	74.25	72.49
KRH76791	Soybean	cytosol	73.44	72.46
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	71.82	71.05
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	71.54	70.78
GSMUA_Achr4P27870_001	Banana	cytosol	62.06	60.26
GSMUA_Achr2P13560_001	Banana	cytosol	58.54	57.29
Zm00001d012676_P001	Maize	cytosol	57.45	55.5
TraesCS3A01G302500.1	Wheat	cytosol	57.72	55.47
OQU89854	Sorghum	cytosol	57.45	55.21
TraesCS3B01G333900.1	Wheat	cytosol	57.45	55.06
TraesCS3D01G299300.1	Wheat	cytosol	57.18	54.95
EES03659	Sorghum	cytosol	56.64	54.43
Bra003768.1-P	Field mustard	cytosol	57.99	54.04
Bra008179.1-P	Field mustard	cytosol	57.45	53.54
Zm00001d043364_P001	Maize	mitochondrion	16.53	50.41
HORVU3Hr1G073950.2	Barley	plastid	57.18	48.84
Bra031821.1-P	Field mustard	cytosol	91.6	45.13
Bra009139.1-P	Field mustard	cytosol	53.93	44.82
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	47.15	40.09
Bra014725.1-P	Field mustard	nucleus	46.61	40.0
Bra038214.1-P	Field mustard	mitochondrion, plastid	45.26	36.38
Bra022430.1-P	Field mustard	mitochondrion, plastid	45.26	35.61
Bra005901.1-P	Field mustard	cytosol	34.15	34.24
Bra035117.1-P	Field mustard	mitochondrion	38.21	33.81
Bra014219.1-P	Field mustard	plastid	43.09	32.58
Bra010924.1-P	Field mustard	mitochondrion, plastid	42.01	29.03

Protein Annotations

EnsemblPlants:Bra012096.1	EnsemblPlants:Bra012096.1-P	EnsemblPlantsGene:Bra012096	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF9
PFAM:PF04788	UniParc:UPI00025417CF	UniProt:M4D6I7	MapMan:27.4.5.3	:	:

Description

AT5G66740 (E=4e-207) | unknown protein

Coordinates

chrA07:-:10048499..10050029

Molecular Weight (calculated)

41243.3 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.282

Length

369 amino acids

Sequence
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNPALRCQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDSSIQAST
101: AKYIVQQYIA ATGGPAALNA VNSMCVTGQV KMTASEFHQG DESVGNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGLNFEII HHTIWGYFSQ RSGLLIQFED SRLLSMRTKD GDVFWETSAE
301: SVMDDYRYVD NVNIAHGGIT SVTVFRYGEA SANHRRQMTE KWRIEEVDFN VWGLSVDHFR PPANLKIGK

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.