Factsheet for Bra010924.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra001236.1-P
Bra027467.1-P
Bra029623.1-P
Bra033652.1-P
Bra040362.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27690.1	Bra000214.1-P	AT2G41100.1	17360592
AT1G27690.1	Bra001236.1-P	AT3G07120.1	21798944
AT1G27690.1	Bra029623.1-P	AT3G07120.1	21798944
AT1G27690.1	Bra040362.1-P	AT3G07120.1	21798944
AT1G27690.1	Bra027467.1-P	AT5G42940.1	21798944
AT1G27690.1	Bra033652.1-P	AT5G42940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90103	Canola	mitochondrion, plastid	91.76	96.65
AT1G27690.1	Thale cress	plastid	76.4	94.23
PGSC0003DMT400055468	Potato	plastid	55.06	62.55
VIT_18s0001g09450.t01	Wine grape	plastid	54.87	62.47
KRH15430	Soybean	plastid	55.06	62.16
KRH05611	Soybean	plastid	54.87	61.55
GSMUA_Achr3P02230_001	Banana	cytosol, plastid	34.64	60.26
GSMUA_Achr4P14230_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	51.5	60.04
Bra038214.1-P	Field mustard	mitochondrion, plastid	49.63	57.73
GSMUA_Achr6P24020_001	Banana	cytosol	43.26	57.61
GSMUA_Achr6P16820_001	Banana	cytosol	47.57	57.6
Bra022430.1-P	Field mustard	mitochondrion, plastid	50.56	57.57
TraesCS5B01G078600.2	Wheat	cytosol	45.69	56.74
Os03t0606100-01	Rice	cytosol	46.63	56.59
OQU79433	Sorghum	cytosol	47.57	56.57
GSMUA_Achr10P...	Banana	cytosol	41.2	56.56
Solyc04g078190.2.1	Tomato	nucleus, plastid	30.9	56.31
GSMUA_Achr7P00620_001	Banana	mitochondrion	42.88	56.27
GSMUA_Achr4P32590_001	Banana	cytosol	47.57	56.19
HORVU5Hr1G018870.3	Barley	cytosol, mitochondrion	47.94	55.65
TraesCS5A01G072300.1	Wheat	cytosol	47.94	55.29
TraesCS5D01G085100.1	Wheat	cytosol	47.57	54.86
TraesCS4D01G076200.1	Wheat	cytosol, mitochondrion	46.82	54.7
TraesCS4A01G237300.1	Wheat	cytosol, mitochondrion	46.82	54.7
TraesCS4B01G077800.1	Wheat	cytosol	46.82	54.7
GSMUA_Achr10P...	Banana	plastid	42.32	53.94
Os12t0581300-01	Rice	cytosol	15.73	53.16
GSMUA_Achr7P26350_001	Banana	cytosol, mitochondrion, peroxisome, plastid	47.57	52.92
Bra014219.1-P	Field mustard	plastid	48.13	52.66
GSMUA_Achr2P21540_001	Banana	plastid	43.07	52.63
EER91248	Sorghum	cytosol	45.88	52.46
Zm00001d030837_P001	Maize	cytosol, mitochondrion	46.44	51.88
GSMUA_Achr2P13470_001	Banana	cytosol	42.51	51.71
Zm00001d013746_P001	Maize	cytosol	44.76	51.62
OQU92347	Sorghum	mitochondrion, plastid	47.0	51.54
TraesCS2D01G192800.1	Wheat	nucleus	48.69	51.38
TraesCS2B01G211900.1	Wheat	nucleus	48.69	51.08
TraesCS2A01G194900.1	Wheat	nucleus	48.5	50.98
Os07t0591100-01	Rice	nucleus	49.25	50.77
EER99634	Sorghum	nucleus	49.06	50.19
Zm00001d016585_P002	Maize	extracellular, plasma membrane	23.6	49.8
Zm00001d047324_P001	Maize	cytosol	45.32	49.39
Zm00001d006749_P001	Maize	cytosol	47.19	47.91
HORVU4Hr1G013190.8	Barley	mitochondrion	44.94	47.52
Zm00001d022006_P001	Maize	cytosol, plastid	48.69	46.68
Bra005901.1-P	Field mustard	cytosol	30.52	44.29
Bra035117.1-P	Field mustard	mitochondrion	34.46	44.12
Bra023074.1-P	Field mustard	plastid	27.9	43.82
Bra012096.1-P	Field mustard	cytosol	29.03	42.01
Bra009139.1-P	Field mustard	cytosol	31.84	38.29
Bra014725.1-P	Field mustard	nucleus	29.96	37.21
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	30.15	37.1
Bra008179.1-P	Field mustard	cytosol	26.59	35.86
Bra003768.1-P	Field mustard	cytosol	26.4	35.61
Bra031821.1-P	Field mustard	cytosol	28.65	20.43

Protein Annotations

EnsemblPlants:Bra010924.1	EnsemblPlants:Bra010924.1-P	EnsemblPlantsGene:Bra010924	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF7	PFAM:PF04788	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002545A52	UniProt:M4D371	MapMan:5.8.2.4	MapMan:27.4.5.3	:	:

Description

AT1G27690 (E=3e-187) | unknown protein

Coordinates

chrA08:-:17132703..17135804

Molecular Weight (calculated)

57946.3 Da

IEP (calculated)

9.250

GRAVY (calculated)

-0.284

Length

534 amino acids

Sequence
(BLAST)

001: MDKKHGLFSK SHSRRSRSKS PVRAVSPIII RRRKGRYVSQ PDRHVSEMLP PVIEGPDPDG EDSGSSGDYS RLERRWYNWM KCQLPVAPPS VSSSSGFKRT
101: DLRLLLGVLG APLGPVHVSA LDLLPHLSIK NTPMETSSAQ YILQQYTAAS GGYKLHSSVQ NGYVMGRIRT VASEFETGSK GSKSKSNSSK AVESGGFVLW
201: HMSPDMWYME LVLGGSKVLA GCDGKLVWRH TPWLGPHAAK GPVRPLRRAL QGLDPRTTAN MFASARCIGE KKIDGEDCFI LKLCADPATL KARSEGASET
301: IRHTLFGYFS QKTGLLVHLE DSQLTRIQNI GGEAVYWETT INSYLEDYKP VEGIVIAHSG RSVATLLRFG DMSSGHNTKT TMQEAWVIDE IAFNVPGLSM
401: DCFIPPSELR FDSHVEELSQ GPKIKTLQQV GGGREHSIAD SQTQQKKIMV LSDFTGVGVG FGFGVGCGFG VGWGFGGMPL NVLGVGVGGG CGVGLGLGWG
501: FGTAFGSHYR SSRLTFQGVE LEKDGKVENM SNNS

Best Arabidopsis Sequence Match ( AT1G27690.1 )
(BLAST)

001: MDKKHGLFSK SNSRRPRSKS PVRSVSPIII RRRKGRYVTQ PDRHMSEMLA PVIEGPDPDA EDSGSSGDYS RFERRWYNWM KCQLPVAPPS VSSSSDFKRT
101: DLRLLLGVLG APLGPVHVSA LDLLPHLSIK NTPMETSSAQ YILQQYTAAS GGQKLHSSVQ NGYVMGRIRT MASEFETGSK GSKSKNNSSK AVESGGFVLW
201: HMNPDMWYME LVLGGSKVLA GCDGKLVWRH TPWLGPHAAK GPVRPLRRAL QGLDPRTTAY MFANARCIGE KKIDGEDCFI LKLCADPATL KARSEGASET
301: IRHTLFGYFS QKTGLLVHLE DSQLTRIQNN GGEAVYWETT INSYLEDYKP VEGIMIAHSG RSVATLLRFG DMSSGHNTKT TMQEAWVIDE ISFNVPGLSI
401: DCFIPPSELR FDSHVEDLSQ GPKIRTLHGH KNG

Arabidopsis Description

Lipase, putative (DUF620) [Source:UniProtKB/TrEMBL;Acc:Q8RWY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.