Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03939 | Canola | cytosol | 23.72 | 50.85 |
| Zm00001d006749_P001 | Maize | cytosol | 69.17 | 33.27 |
| TraesCS2D01G192800.1 | Wheat | nucleus | 66.01 | 33.0 |
| TraesCS2A01G194900.1 | Wheat | nucleus | 65.61 | 32.68 |
| TraesCS2B01G211900.1 | Wheat | nucleus | 65.22 | 32.42 |
| EER99634 | Sorghum | nucleus | 66.01 | 31.99 |
| Os07t0591100-01 | Rice | nucleus | 64.82 | 31.66 |
| Zm00001d013746_P001 | Maize | cytosol | 57.31 | 31.32 |
| VIT_03s0091g00410.t01 | Wine grape | plastid | 58.5 | 31.16 |
| CDX95439 | Canola | mitochondrion | 52.96 | 30.8 |
| CDY16530 | Canola | plastid | 54.55 | 30.53 |
| CDY50147 | Canola | mitochondrion | 52.96 | 30.52 |
| PGSC0003DMT400066530 | Potato | plastid | 56.52 | 30.43 |
| KRG91072 | Soybean | plastid | 55.34 | 30.24 |
| PGSC0003DMT400055468 | Potato | plastid | 56.13 | 30.21 |
| Zm00001d030837_P001 | Maize | cytosol, mitochondrion | 56.92 | 30.13 |
| KRH35700 | Soybean | plastid | 54.94 | 30.09 |
| Solyc01g107350.2.1 | Tomato | plastid | 55.73 | 30.0 |
| Zm00001d047324_P001 | Maize | cytosol | 58.1 | 30.0 |
| CDY32838 | Canola | plastid | 53.36 | 29.67 |
| VIT_18s0001g09450.t01 | Wine grape | plastid | 54.94 | 29.64 |
| CDY67693 | Canola | mitochondrion | 52.96 | 29.52 |
| Zm00001d022006_P001 | Maize | cytosol, plastid | 64.82 | 29.44 |
| CDY46168 | Canola | mitochondrion | 52.96 | 29.39 |
| KRH05611 | Soybean | plastid | 54.94 | 29.2 |
| KRH15430 | Soybean | plastid | 54.55 | 29.18 |
| Bra038214.1-P | Field mustard | mitochondrion, plastid | 52.57 | 28.98 |
| Bra022430.1-P | Field mustard | mitochondrion, plastid | 53.36 | 28.78 |
| Bra014219.1-P | Field mustard | plastid | 54.55 | 28.28 |
| AT3G19540.1 | Thale cress | plastid | 54.15 | 28.25 |
| AT1G49840.1 | Thale cress | plastid | 54.55 | 27.94 |
| AT1G27690.1 | Thale cress | plastid | 43.87 | 25.64 |
| CDY67976 | Canola | mitochondrion, plastid | 50.59 | 25.25 |
| CDX90103 | Canola | mitochondrion, plastid | 50.59 | 25.25 |
| Zm00001d027816_P001 | Maize | cytosol | 35.57 | 24.93 |
| Bra010924.1-P | Field mustard | mitochondrion, plastid | 49.8 | 23.6 |
| Zm00001d012676_P001 | Maize | cytosol | 32.81 | 21.73 |
| Zm00001d047840_P001 | Maize | cytosol, peroxisome, plastid | 37.94 | 21.1 |
| Zm00001d028565_P002 | Maize | cytosol | 37.15 | 20.43 |
| Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 35.97 | 18.76 |
| Zm00001d043364_P001 | Maize | mitochondrion | 8.3 | 17.36 |
| Solyc04g078190.2.1 | Tomato | nucleus, plastid | 6.32 | 5.46 |
Protein Annotations
| EnsemblPlants:Zm00001d016585_P002 | EnsemblPlants:Zm00001d016585_T002 | EnsemblPlantsGene:Zm00001d016585 | InterPro:DUF620 | InterPro:IPR006629 | InterPro:LITAF |
| PANTHER:PTHR31300 | PANTHER:PTHR31300:SF5 | PFAM:PF04788 | PFAM:PF10601 | ProteinID:AQK71211.1 | SignalP:SignalP-noTM |
| SMART:SM00714 | UniParc:UPI000843798E | UniProt:A0A1D6H917 | MapMan:27.2.2 | MapMan:27.4.5.3 | : |
Description
Lipase-like protein
Coordinates
chr5:+:168385203..168388146
Molecular Weight (calculated)
27807.6 Da
IEP (calculated)
4.966
GRAVY (calculated)
0.101
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPFLLAMAM QGLDPLTTAG LFAEAWCVGE KKVNGEECFI LKLAADPQML KLRSEGQAEI IRHVLFGYFS QRTALMVHIE DSHLTRIQPH AGGDVVYWET
101: TTSSALEDYR AVEGVMIAHS GRSAVTLFRF GEAAMSHTKT RMEEAWSIEE VAFNVPGLSA DCFIPPADIQ SGPVGEACEL PPSQSKPSLA SVVACMMPFM
201: LGVCFLCPSM DCLWHKYHYC PSCGEKVGEF RKSDPCLVVD ATRWSEPSFA VPA
101: TTSSALEDYR AVEGVMIAHS GRSAVTLFRF GEAAMSHTKT RMEEAWSIEE VAFNVPGLSA DCFIPPADIQ SGPVGEACEL PPSQSKPSLA SVVACMMPFM
201: LGVCFLCPSM DCLWHKYHYC PSCGEKVGEF RKSDPCLVVD ATRWSEPSFA VPA
001: MDKKHGLFSK SNSRRPRSKS PVRSVSPIII RRRKGRYVTQ PDRHMSEMLA PVIEGPDPDA EDSGSSGDYS RFERRWYNWM KCQLPVAPPS VSSSSDFKRT
101: DLRLLLGVLG APLGPVHVSA LDLLPHLSIK NTPMETSSAQ YILQQYTAAS GGQKLHSSVQ NGYVMGRIRT MASEFETGSK GSKSKNNSSK AVESGGFVLW
201: HMNPDMWYME LVLGGSKVLA GCDGKLVWRH TPWLGPHAAK GPVRPLRRAL QGLDPRTTAY MFANARCIGE KKIDGEDCFI LKLCADPATL KARSEGASET
301: IRHTLFGYFS QKTGLLVHLE DSQLTRIQNN GGEAVYWETT INSYLEDYKP VEGIMIAHSG RSVATLLRFG DMSSGHNTKT TMQEAWVIDE ISFNVPGLSI
401: DCFIPPSELR FDSHVEDLSQ GPKIRTLHGH KNG
101: DLRLLLGVLG APLGPVHVSA LDLLPHLSIK NTPMETSSAQ YILQQYTAAS GGQKLHSSVQ NGYVMGRIRT MASEFETGSK GSKSKNNSSK AVESGGFVLW
201: HMNPDMWYME LVLGGSKVLA GCDGKLVWRH TPWLGPHAAK GPVRPLRRAL QGLDPRTTAY MFANARCIGE KKIDGEDCFI LKLCADPATL KARSEGASET
301: IRHTLFGYFS QKTGLLVHLE DSQLTRIQNN GGEAVYWETT INSYLEDYKP VEGIMIAHSG RSVATLLRFG DMSSGHNTKT TMQEAWVIDE ISFNVPGLSI
401: DCFIPPSELR FDSHVEDLSQ GPKIRTLHGH KNG
Arabidopsis Description
Lipase, putative (DUF620) [Source:UniProtKB/TrEMBL;Acc:Q8RWY0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.