Factsheet for Zm00001d047840_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028565_P002	Maize	cytosol	85.71	84.78
TraesCS4A01G093200.1	Wheat	cytosol, nucleus, plastid	82.42	83.89
TraesCS4B01G211300.1	Wheat	cytosol, nucleus, plastid	82.2	83.86
TraesCS4D01G211900.1	Wheat	cytosol, nucleus, plastid	82.86	83.78
Os03t0267500-01	Rice	plasma membrane	80.88	83.45
HORVU4Hr1G060590.5	Barley	mitochondrion	82.86	75.4
GSMUA_Achr5P28960_001	Banana	cytosol	60.66	63.3
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	52.53	63.06
GSMUA_Achr6P33890_001	Banana	cytosol	50.55	60.05
VIT_13s0019g03180.t01	Wine grape	cytosol	55.82	59.62
PGSC0003DMT400059652	Potato	cytosol	51.87	56.32
Solyc03g078650.2.1	Tomato	cytosol, nucleus, plastid	51.87	56.19
PGSC0003DMT400069768	Potato	cytosol	24.62	55.72
KRH31070	Soybean	cytosol	52.97	55.28
KRH73113	Soybean	cytosol	51.21	54.95
KRG97798	Soybean	cytosol	52.75	54.67
Zm00001d043364_P001	Maize	mitochondrion	14.51	54.55
PGSC0003DMT400069765	Potato	cytosol	53.19	54.5
KRH15018	Soybean	cytosol	50.99	54.33
AT5G05840.1	Thale cress	cytosol	52.31	54.21
Zm00001d012676_P001	Maize	cytosol	45.49	54.19
Solyc05g052860.2.1	Tomato	cytosol	52.31	53.72
CDX70123	Canola	cytosol	52.09	53.5
Bra009139.1-P	Field mustard	cytosol	52.09	53.38
CDX98870	Canola	cytosol	51.87	53.15
CDY27272	Canola	cytosol, nucleus, plastid	43.96	46.08
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	43.96	46.08
Zm00001d037792_P001	Maize	cytosol, nucleus, plastid	48.57	45.57
Bra014725.1-P	Field mustard	nucleus	42.86	45.35
CDY02955	Canola	cytosol, nucleus, plastid	40.22	45.3
AT3G55720.1	Thale cress	nucleus	43.52	45.21
CDX76076	Canola	cytosol, nucleus, plastid	39.34	44.31
Zm00001d013746_P001	Maize	cytosol	41.54	40.82
Zm00001d027816_P001	Maize	cytosol	32.31	40.72
Zm00001d030837_P001	Maize	cytosol, mitochondrion	41.76	39.75
Zm00001d047324_P001	Maize	cytosol	41.32	38.37
Zm00001d016585_P002	Maize	extracellular, plasma membrane	21.1	37.94
Zm00001d006749_P001	Maize	cytosol	41.54	35.93
Zm00001d022006_P001	Maize	cytosol, plastid	43.3	35.37

Protein Annotations

EMBL:BT061781	EnsemblPlants:Zm00001d047840_P001	EnsemblPlants:Zm00001d047840_T001	EnsemblPlantsGene:Zm00001d047840	EntrezGene:100275600	InterPro:DUF620
PANTHER:PTHR31300	PANTHER:PTHR31300:SF2	PFAM:PF04788	ProteinID:AQL07767.1	SEG:seg	UniParc:UPI0001948A29
UniProt:C0HHH5	MapMan:27.4.5.3	:	:	:	:

Description

No Description!

Coordinates

chr9:-:143017079..143020101

Molecular Weight (calculated)

48352.5 Da

IEP (calculated)

6.820

GRAVY (calculated)

-0.223

Length

455 amino acids

Sequence
(BLAST)

001: MRKVCPNLER DDALDTVLEV PIPEEMFSGG GGGGGGSCGF RFGCTSVKAW MRSHAADRCG AGEPCSMSRG ELQLMLGVIG APLVPLPVAV CCRAEQSPCS
101: VLCEQLKTGP IESSSAKYIV QQYVAASGGE RALDRVKSMY AMGKVRMTAA EQLNGSDAAG GHCGGATGKG NRGGRRKGRG GEVGGFVLWQ KRPELWCLEL
201: VVSGCKISAG SDGKVAWRQT PWHQSHASRG PPRPLRRSLQ GLDPQLTASL FADSVCIGER SVDGEDCFVL KVEAEASSLR ARNSGSVEIV RHTLWGYFSQ
301: RTGLLVQLED SHLLQIRSGG GGGGGSIFWE TTVESRLGDY RAVDGVNIAH AGRTAVSLVR FGDCQQDGSS ARTRMEETWD IEEVDFNIWG LSMDCFLPPS
401: DLREGGKESQ DVAVAVAKAD ARPPPIRIPA VAVRVGPSQV AAVSMDDSDS LIARP

Best Arabidopsis Sequence Match ( AT5G05840.1 )
(BLAST)

001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.