Factsheet for TraesCS4B01G211300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G211900.1	Wheat	cytosol, nucleus, plastid	97.53	96.67
TraesCS4A01G093200.1	Wheat	cytosol, nucleus, plastid	96.19	95.97
EER95119	Sorghum	cytosol	88.79	89.39
Zm00001d028565_P002	Maize	cytosol	89.69	86.96
Os03t0267500-01	Rice	plasma membrane	85.87	86.85
HORVU4Hr1G060590.5	Barley	mitochondrion	93.72	83.6
Zm00001d047840_P001	Maize	cytosol, peroxisome, plastid	83.86	82.2
GSMUA_Achr5P28960_001	Banana	cytosol	65.25	66.74
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	56.5	66.49
GSMUA_Achr6P33890_001	Banana	cytosol	54.48	63.45
VIT_13s0019g03180.t01	Wine grape	cytosol	57.85	60.56
Solyc03g078650.2.1	Tomato	cytosol, nucleus, plastid	54.93	58.33
PGSC0003DMT400059652	Potato	cytosol	54.71	58.23
PGSC0003DMT400069768	Potato	cytosol	25.78	57.21
KRH15018	Soybean	cytosol	54.04	56.44
KRH73113	Soybean	cytosol	53.59	56.37
PGSC0003DMT400069765	Potato	cytosol	55.83	56.08
AT5G05840.1	Thale cress	cytosol	54.93	55.81
KRH31070	Soybean	cytosol	54.48	55.73
Solyc05g052860.2.1	Tomato	cytosol	55.16	55.53
KRG97798	Soybean	cytosol	54.48	55.35
CDX70123	Canola	cytosol	54.71	55.08
TraesCS3B01G333900.1	Wheat	cytosol	47.53	55.06
Bra009139.1-P	Field mustard	cytosol	54.71	54.95
CDX98870	Canola	cytosol	54.48	54.73
TraesCS1B01G151200.1	Wheat	nucleus	50.67	48.39
CDY27272	Canola	cytosol, nucleus, plastid	46.41	47.7
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	46.41	47.7
Bra014725.1-P	Field mustard	nucleus	45.96	47.67
CDY02955	Canola	cytosol, nucleus, plastid	42.83	47.28
AT3G55720.1	Thale cress	nucleus	46.19	47.03
CDX76076	Canola	cytosol, nucleus, plastid	42.6	47.03
TraesCS4B01G077800.1	Wheat	cytosol	43.72	42.67
TraesCS5B01G078600.2	Wheat	cytosol	40.13	41.63
TraesCS4B01G282900.1	Wheat	cytosol	31.39	38.36
TraesCS2B01G211900.1	Wheat	nucleus	43.5	38.11

Protein Annotations

EnsemblPlants:TraesCS4B01G211300.1	EnsemblPlantsGene:TraesCS4B01G211300	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF2	PFAM:PF04788
SEG:seg	MapMan:27.4.5.3	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:449645498..449648425

Molecular Weight (calculated)

48022.0 Da

IEP (calculated)

6.325

GRAVY (calculated)

-0.318

Length

446 amino acids

Sequence
(BLAST)

001: MRKLCPNLER DDALDTVLEV PIPEEMFSGA GGGSRGSRFG CASVKAWMRS HAADRSGAGE PCSMSRGELQ LMLGVIGAPL IPLPVSHAKQ SPSSVLCEQL
101: KGDPIESSSA KYIVQQYIAA SGGEWALNKV TSMYAMGKVR MTAAELNSSD ADGSSNNGGA QRGGKKGGGK GGAGGEIGGF VLWQKKPELW CLELVVSGCK
201: ISAGSDGKVA WRQTPWHQSH ASRGPPRPLR RSLQGLDPML TASLFAEDSV CIGERSIDGE DCFVLKVEAE ASSLRARNSS SVEIIRHTVW GYFSQRTGLL
301: VQLEDSHLLQ IKSGGGSVFW ETTMESRLRD YRAVDGVNIA HSGRTAVSLV RFGDTQDGNT RTRMEEHWDI EEVDFNIWGL SMDCFLPPSD LRDGGKESQQ
401: QQQEELAVVK AARPPPLRIP AVAVVRVGPS QVAAVNLDET ESLLAR

Best Arabidopsis Sequence Match ( AT5G05840.1 )
(BLAST)

001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET

Arabidopsis Description

Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.