Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G133000.1 | Wheat | cytosol | 92.08 | 95.13 |
| TraesCS1D01G131900.1 | Wheat | cytosol | 91.65 | 94.07 |
| Os05t0252100-01 | Rice | cytosol | 66.17 | 63.32 |
| EES17962 | Sorghum | cytosol, nucleus, plastid | 64.24 | 63.16 |
| Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 60.39 | 58.14 |
| TraesCS4B01G211300.1 | Wheat | cytosol, nucleus, plastid | 48.39 | 50.67 |
| TraesCS3B01G333900.1 | Wheat | cytosol | 37.26 | 45.19 |
| TraesCS4B01G282900.1 | Wheat | cytosol | 32.76 | 41.92 |
| TraesCS5B01G078600.2 | Wheat | cytosol | 33.83 | 36.74 |
| TraesCS4B01G077800.1 | Wheat | cytosol | 35.76 | 36.54 |
| TraesCS2B01G211900.1 | Wheat | nucleus | 36.19 | 33.2 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G151200.1 | EnsemblPlantsGene:TraesCS1B01G151200 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF6 | PFAM:PF04788 |
| SEG:seg | MapMan:27.4.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:236953231..236954741
Molecular Weight (calculated)
50723.4 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.417
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVCPNLDR EDGLDTVLEV PVPELHQEVP ARRRRRRTVK AWMRSHMHID HHHMHHRDGV QVMLGVMGAP LVPQPVQPRR PMGGRDSKEE PLELSKARYI
101: VEQYVAAAGG EAALSAATSM FAMGKVRMSS TTSKSSKATK KGMGEVHGGF VVWQKKPELW CVEMVMAGGT KMSAGSDGKV AWRQTPWQQQ AHASRGPPRL
201: IRRCVQGLDP KSTADLFSSA ASAGEEAVDG EDCFVLRVDA EPSALHARSS ADVEVIRHAL WGYFSQRTGL LVRLEDSHLL RIPRPADAGG EGKAASASMY
301: WETAMASTIG DYRPLDGINI AHAGRTIVSV SPFTRAAGAV DDVDADARRK RPCTCMEETW SIEEVEFNIA GLSTECFLPP RDLLLSDSKE QPRHNKEQGD
401: KAAKGARDSV KAAYDSDGGC GIRAAVPKKA LVPVVTGLGW FGPAKVAAVD SLDAADESKD ATYASTR
101: VEQYVAAAGG EAALSAATSM FAMGKVRMSS TTSKSSKATK KGMGEVHGGF VVWQKKPELW CVEMVMAGGT KMSAGSDGKV AWRQTPWQQQ AHASRGPPRL
201: IRRCVQGLDP KSTADLFSSA ASAGEEAVDG EDCFVLRVDA EPSALHARSS ADVEVIRHAL WGYFSQRTGL LVRLEDSHLL RIPRPADAGG EGKAASASMY
301: WETAMASTIG DYRPLDGINI AHAGRTIVSV SPFTRAAGAV DDVDADARRK RPCTCMEETW SIEEVEFNIA GLSTECFLPP RDLLLSDSKE QPRHNKEQGD
401: KAAKGARDSV KAAYDSDGGC GIRAAVPKKA LVPVVTGLGW FGPAKVAAVD SLDAADESKD ATYASTR
001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT1G75160]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.