Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- plastid 2
- extracellular 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037792_P001 | Maize | cytosol, nucleus, plastid | 78.53 | 76.91 |
| TraesCS1A01G133000.1 | Wheat | cytosol | 63.58 | 66.81 |
| TraesCS1D01G131900.1 | Wheat | cytosol | 63.58 | 66.37 |
| Os05t0252100-01 | Rice | cytosol | 66.74 | 64.96 |
| TraesCS1B01G151200.1 | Wheat | nucleus | 63.16 | 64.24 |
| EER95119 | Sorghum | cytosol | 48.21 | 51.69 |
| EES03659 | Sorghum | cytosol | 38.74 | 47.92 |
| OQU89854 | Sorghum | cytosol | 38.11 | 47.14 |
| EER95445 | Sorghum | cytosol | 31.58 | 40.87 |
| OQU79433 | Sorghum | cytosol | 35.58 | 37.64 |
| EER91248 | Sorghum | cytosol | 35.58 | 36.19 |
| EER99634 | Sorghum | nucleus | 36.84 | 33.52 |
| OQU92347 | Sorghum | mitochondrion, plastid | 34.32 | 33.47 |
Protein Annotations
| EnsemblPlants:EES17962 | EnsemblPlantsGene:SORBI_3009G092300 | EntrezGene:8066749 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF6 |
| PFAM:PF04788 | ProteinID:EES17962 | ProteinID:EES17962.1 | RefSeq:XP_002439532.1 | SEG:seg | UniParc:UPI0001A88B3C |
| UniProt:C5YVP4 | MapMan:27.4.5.3 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:21310753..21313505
Molecular Weight (calculated)
51218.9 Da
IEP (calculated)
7.458
GRAVY (calculated)
-0.300
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKVCANLDR EDGLDTVLEV PVPELYKEPS SSGHGRRRRR TVKAWVWSRM DQHHRRYGAL PSQADVQLML GVIGAPLVPQ PIEARKAMAG EDIKEEPLEV
101: SKAKYIVEQY VAASGGEPAL SAATSMYAVG KVLMRATKGQ KAKTGMGVVH GGGDIAGGFV VWQKRPEMWC VEMVVAGGTK MSAGSDGKVA WRQTPWQQAH
201: ASRGPPRPLR RCVQGLDPKS TANLFSTATW VGEKTIDGDD CFVLRVDADP LALRARSSAD VEVVRHAVWG YFSQRTGLLD RLEDSHLLRI RMQGASSAQT
301: AYWETSMESS IGDYRAVNGI NIAHAGRTVV SLSRFGSSAN DQDDGSDTDV LGSKRTCTCM EETWSIEEVD FNIMGLSTEC FLPPRDLVPC SSKPVEKEHC
401: AGLDHSCKKE DAVGTVPATS AVVGSCDPAA VDVKYKNSDG GVRPLATARK ALVPAGTGLS WFGTAKVVAV DTAAE
101: SKAKYIVEQY VAASGGEPAL SAATSMYAVG KVLMRATKGQ KAKTGMGVVH GGGDIAGGFV VWQKRPEMWC VEMVVAGGTK MSAGSDGKVA WRQTPWQQAH
201: ASRGPPRPLR RCVQGLDPKS TANLFSTATW VGEKTIDGDD CFVLRVDADP LALRARSSAD VEVVRHAVWG YFSQRTGLLD RLEDSHLLRI RMQGASSAQT
301: AYWETSMESS IGDYRAVNGI NIAHAGRTVV SLSRFGSSAN DQDDGSDTDV LGSKRTCTCM EETWSIEEVD FNIMGLSTEC FLPPRDLVPC SSKPVEKEHC
401: AGLDHSCKKE DAVGTVPATS AVVGSCDPAA VDVKYKNSDG GVRPLATARK ALVPAGTGLS WFGTAKVVAV DTAAE
001: MRKLCPNYNL EDGLETVLEV PMPEELFAAS KTKPGWNQMK SYWSKPTATA TGTATATNMT RLFGGRNAEI QLLLGVVGAP LIPLPVQPDH HNDYENPIHK
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
101: DIKDQPLEMS MAQYIVKQYI AAVGGDRALN AVESMYAMGK VRMTASEFCT GEGSLNSKMV KARSIKSGGG EVGGFVLWQK GIELWCLELV VSGCKISAGS
201: DAKVAWRQTP WHPSHASRGP PRPLRRFLQG LDPKSTANLF ARSVCMGEKK INDEDCFILK LDAEPSALKA RSSSNVEIIR HTVWGCFSQR TGLLIQLEDS
301: HLLRIKAQDD NSIFWETTME SLIQDYRTVD GILVAHAGKS SVSLFRFGEN SDNHSRTRME ETWEIEEMDF NIKGLSMDCF LPPSDLKKDD DEEEEIECGL
401: AANNEKLPMK IRSASLRISS SKVLAIVEEE DESEVTEET
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FFJ4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.