CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027816_P001	Maize	cytosol	95.91	97.51
Os03t0167400-00	Rice	cytosol	89.1	89.34
TraesCS4D01G281900.1	Wheat	cytosol	88.01	88.49
TraesCS4A01G020600.1	Wheat	cytosol	87.74	87.74
TraesCS4B01G282900.1	Wheat	cytosol	87.19	87.67
GSMUA_Achr3P29550_001	Banana	cytosol	61.31	63.2
Solyc03g051920.2.1	Tomato	cytosol	47.68	49.58
KRG96347	Soybean	cytosol	47.68	49.58
KRH71794	Soybean	cytosol	48.77	49.45
PGSC0003DMT400066079	Potato	cytosol	47.41	49.43
KRH38019	Soybean	peroxisome	47.96	48.75
KRH68081	Soybean	cytosol	47.14	48.46
AT5G06610.1	Thale cress	cytosol	46.32	46.2
CDY55767	Canola	cytosol	46.05	45.92
CDX81011	Canola	cytosol	46.05	45.92
Bra005901.1-P	Field mustard	cytosol	45.78	45.65
OQU79433	Sorghum	cytosol	44.96	36.75
EER91248	Sorghum	cytosol	46.59	36.62
OQU92347	Sorghum	mitochondrion, plastid	45.78	34.5
OQU89854	Sorghum	cytosol	35.42	33.85
EER99634	Sorghum	nucleus	47.14	33.14
EES03659	Sorghum	cytosol	34.6	33.07
EER95119	Sorghum	cytosol	39.78	32.96
EES17962	Sorghum	cytosol, nucleus, plastid	40.87	31.58
VIT_08s0007g07110.t01	Wine grape	cytosol	49.32	27.42

Protein Annotations

EnsemblPlants:EER95445	EnsemblPlantsGene:SORBI_3001G492800	EntrezGene:8059834	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF3
PFAM:PF04788	ProteinID:EER95445	ProteinID:EER95445.1	RefSeq:XP_002468447.1	SEG:seg	UniParc:UPI0001A82F74
UniProt:C5WWU7	MapMan:27.4.5.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:76202998..76206852

Molecular Weight (calculated)

38609.9 Da

IEP (calculated)

8.128

GRAVY (calculated)

-0.086

Length

367 amino acids

Sequence
(BLAST)

001: MRSRVALEPL AEEPGGGEEE AARRRTGLHA ALHRWARLLS GGAAGDDARP AADLRVLLSV LACPLSPVPV LPRLPRHVAS SAQYIIEQFR ATTGCGKLED
101: GAVKSMYASG RVRLSMLQDP SGGGSGVIGS GGGRGHEGSF VLWQLAPSMW LVEMSVAGQS VAAGSDGRVA WRRTPWLGAH AARGGSRPLR RALQGLDPVT
201: IASIFSTAEH AGEKEVDGED CFVLRLDVGP SVLSSWSDGT AEVIRHGLTG FFSQRSGLLA RLEDSQLTRI QSPGAAAMYW ETTIASTVSD YRAVDGGVAV
301: AHAGTSTAHL ARFGVGVRAA RVVTRMEESW TIDDVAFNVP GLGPDAFIPP EEVRRSRSYG AAIAGGK

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.