CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96347	Soybean	cytosol	96.08	97.17
KRH71794	Soybean	cytosol	77.03	75.97
KRH38019	Soybean	peroxisome	75.07	74.24
PGSC0003DMT400066079	Potato	cytosol	68.91	69.89
Solyc03g051920.2.1	Tomato	cytosol	68.35	69.12
CDY55767	Canola	cytosol	62.18	60.33
Bra005901.1-P	Field mustard	cytosol	61.9	60.05
CDX81011	Canola	cytosol	61.9	60.05
AT5G06610.1	Thale cress	cytosol	61.62	59.78
GSMUA_Achr3P29550_001	Banana	cytosol	52.66	52.81
TraesCS4D01G281900.1	Wheat	cytosol	50.14	49.04
TraesCS4B01G282900.1	Wheat	cytosol	50.14	49.04
Zm00001d027816_P001	Maize	cytosol	49.58	49.03
TraesCS4A01G020600.1	Wheat	cytosol	50.14	48.77
Os03t0167400-00	Rice	cytosol	48.74	47.54
EER95445	Sorghum	cytosol	48.46	47.14
KRH13789	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	46.5	43.23
KRH43665	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	46.22	42.86
VIT_08s0007g07110.t01	Wine grape	cytosol	75.35	40.76
Os10t0411100-00	Rice	cytosol, peroxisome, plasma membrane	48.18	38.39
KRH35700	Soybean	plastid	49.3	38.1
KRG91072	Soybean	plastid	49.3	38.01
KRH15430	Soybean	plastid	47.62	35.94
KRH05611	Soybean	plastid	47.9	35.92
KRH05801	Soybean	cytosol	35.57	32.99
KRH76791	Soybean	cytosol	34.17	32.62
KRH28651	Soybean	cytosol	34.45	32.54
KRH50361	Soybean	cytosol	34.45	32.2
KRG97798	Soybean	cytosol	39.5	32.12
KRH31070	Soybean	cytosol	39.22	32.11
KRH73113	Soybean	cytosol	38.1	32.08
KRH51867	Soybean	cytosol	34.17	31.94
KRH15018	Soybean	cytosol	37.82	31.62

Protein Annotations

EMBL:ACUP02002098	EnsemblPlants:KRH68081	EnsemblPlantsGene:GLYMA_03G207100	EntrezGene:102666073	InterPro:DUF620	PANTHER:PTHR31300
PANTHER:PTHR31300:SF3	PFAM:PF04788	ProteinID:KRH68081	ProteinID:KRH68081.1	UniParc:UPI0002962606	UniProt:I1JQE8
MapMan:27.4.5.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:41456762..41459324

Molecular Weight (calculated)

39974.8 Da

IEP (calculated)

7.212

GRAVY (calculated)

-0.316

Length

357 amino acids

Sequence
(BLAST)

001: MGRLATLSEE PINDQDINYN KRNSSSGSKK WPNWNWIKTH FFHKKPDLKI LLSVLACPLF PVPLHTQPDP PPLNQLSSSA QYIIQHFTAA TGCRKLEGTV
101: KNVFATGKVE MWAVDEVGNT GVSERGCFVI WQMLPDKWQI ELAVAGHKVV AGSDGAVAWR HTPWLGTHAA KGGIRPLRRA VQGLDPLAVS AVFSAAQYMG
201: EKQISGIDCF VLKLSPDQKD LVDRSDNTAE MIKHVAFGYF SQRNGLLVHL EDSYLTRIQS PGTHPTYWET TMSTKIEDYK MVDGVMIAHA GHSTVIITRF
301: GDNLKTGPAI TRLEESWTID DVAFNVQGLS MDCFIPPKEL HKDYPQEDLD WRSPLHR

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.