Factsheet for Bra005901.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55767	Canola	cytosol	99.46	99.46
CDX81011	Canola	cytosol	99.46	99.46
AT5G06610.1	Thale cress	cytosol	84.78	84.78
KRG96347	Soybean	cytosol	60.05	62.61
KRH68081	Soybean	cytosol	60.05	61.9
KRH71794	Soybean	cytosol	60.6	61.6
KRH38019	Soybean	peroxisome	59.51	60.66
PGSC0003DMT400066079	Potato	cytosol	57.34	59.94
Solyc03g051920.2.1	Tomato	cytosol	57.07	59.49
GSMUA_Achr3P29550_001	Banana	cytosol	50.54	52.25
TraesCS4D01G281900.1	Wheat	cytosol	45.92	46.3
Zm00001d027816_P001	Maize	cytosol	45.38	46.26
TraesCS4A01G020600.1	Wheat	cytosol	45.92	46.05
TraesCS4B01G282900.1	Wheat	cytosol	45.65	46.03
EER95445	Sorghum	cytosol	45.65	45.78
Os03t0167400-00	Rice	cytosol	44.57	44.81
Bra035117.1-P	Field mustard	mitochondrion	43.75	38.61
Os10t0411100-00	Rice	cytosol, peroxisome, plasma membrane	44.02	36.16
Bra038214.1-P	Field mustard	mitochondrion, plastid	44.57	35.73
Bra023074.1-P	Field mustard	plastid	32.88	35.59
Bra022430.1-P	Field mustard	mitochondrion, plastid	43.75	34.33
Bra012096.1-P	Field mustard	cytosol	34.24	34.15
VIT_08s0007g07110.t01	Wine grape	cytosol	60.87	33.94
Bra014219.1-P	Field mustard	plastid	41.85	31.56
Bra009139.1-P	Field mustard	cytosol	37.5	31.08
Bra010924.1-P	Field mustard	mitochondrion, plastid	44.29	30.52
Bra003768.1-P	Field mustard	cytosol	32.34	30.05
Bra008179.1-P	Field mustard	cytosol	32.07	29.8
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	32.88	27.88
Bra014725.1-P	Field mustard	nucleus	31.52	26.98
Bra031821.1-P	Field mustard	cytosol	32.88	16.15

Protein Annotations

EnsemblPlants:Bra005901.1	EnsemblPlants:Bra005901.1-P	EnsemblPlantsGene:Bra005901	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF3
PFAM:PF04788	UniParc:UPI000253F649	UniProt:M4CNW3	MapMan:27.4.5.3	:	:

Description

AT5G06610 (E=4e-182) | unknown protein

Coordinates

chrA03:+:1116999..1120177

Molecular Weight (calculated)

41104.7 Da

IEP (calculated)

7.252

GRAVY (calculated)

-0.260

Length

368 amino acids

Sequence
(BLAST)

001: MQRLAPLMEE PMDQEEQERG GGSIRTKSWK KWIKTQLQSM IIHKKPDAKV LLSVLGCPLF PVPPLSKMSL QQVSSSAQYI IQHFAAATGC KKLERGIKNT
101: FVTGKITMTM MNDLSGSATV NASPVSHKGC FVMWQMLPEK WLIELVGGGH KISAGSDGEI AWRYTPWLGD HAAKGAIRPL RRTLQGLDPL TISSVFSSAQ
201: FVGEKEINGK DCFVLKLSTD QTDLTRRSDS TAEMIKHVAF GYFSQKSGLL LCLEDSSLTR IQTPGSLPTY WETSMSSWME DYRAIEGSEV VIAHSGRTDV
301: LISRFVETLK GGISVTRMEE RWTIDDVAFD VPGLSIDCFI PPKEMKMDFH HQDGPNTFPE LLDERQKL

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.