Factsheet for Bra008179.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46011	Canola	cytosol	99.49	99.49
CDY37259	Canola	cytosol	99.49	99.49
Bra003768.1-P	Field mustard	cytosol	95.96	95.96
AT1G75160.1	Thale cress	cytosol	94.7	94.94
VIT_18s0001g12320.t01	Wine grape	cytosol	64.65	68.82
KRH51867	Soybean	cytosol	61.36	63.61
KRH50361	Soybean	cytosol	61.11	63.35
KRH05801	Soybean	cytosol	61.36	63.12
PGSC0003DMT400036213	Potato	cytosol	37.88	59.06
Bra012096.1-P	Field mustard	cytosol	53.54	57.45
PGSC0003DMT400013218	Potato	cytosol	55.81	57.11
Solyc04g080220.2.1	Tomato	cytosol	55.3	56.59
Solyc07g022840.1.1	Tomato	cytosol	53.03	56.3
Zm00001d043364_P001	Maize	mitochondrion	17.17	56.2
GSMUA_Achr2P13560_001	Banana	cytosol	53.28	55.97
GSMUA_Achr4P27870_001	Banana	cytosol	53.54	55.79
Bra023074.1-P	Field mustard	plastid	47.73	55.59
Zm00001d012676_P001	Maize	cytosol	53.03	54.97
OQU89854	Sorghum	cytosol	53.03	54.69
EES03659	Sorghum	cytosol	52.53	54.17
TraesCS3B01G333900.1	Wheat	cytosol	52.02	53.51
TraesCS3D01G299300.1	Wheat	cytosol	51.77	53.39
TraesCS3A01G302500.1	Wheat	cytosol	51.77	53.39
HORVU3Hr1G073950.2	Barley	plastid	51.01	46.76
Bra009139.1-P	Field mustard	cytosol	49.75	44.37
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	47.73	43.55
Bra014725.1-P	Field mustard	nucleus	45.96	42.33
Bra038214.1-P	Field mustard	mitochondrion, plastid	39.9	34.42
Bra022430.1-P	Field mustard	mitochondrion, plastid	38.89	32.84
Bra035117.1-P	Field mustard	mitochondrion	34.34	32.61
Bra005901.1-P	Field mustard	cytosol	29.8	32.07
Bra014219.1-P	Field mustard	plastid	37.37	30.33
Bra031821.1-P	Field mustard	cytosol	52.02	27.5
Bra010924.1-P	Field mustard	mitochondrion, plastid	35.86	26.59

Protein Annotations

EnsemblPlants:Bra008179.1	EnsemblPlants:Bra008179.1-P	EnsemblPlantsGene:Bra008179	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4
PFAM:PF04788	SEG:seg	UniParc:UPI0002545B35	UniProt:M4CVD2	MapMan:27.4.5.3	:

Description

AT1G75160 (E=6e-213) | unknown protein

Coordinates

chrA02:+:13597766..13600075

Molecular Weight (calculated)

43713.3 Da

IEP (calculated)

6.841

GRAVY (calculated)

-0.228

Length

396 amino acids

Sequence
(BLAST)

001: MKMRKLCPNL DNEDGLETVL EVPVPEEMFT KMGSNATGRW RNMHALMKAH AVVTAVAADM RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPAALNAV KSMYAVGQVR MQGSEMVAGE DEGTTTTPVR LGKGNFEVGG FVLWQKNPNL WFLELVVSGF
201: KISAGSDGKV AWNQSSTQPS QAHRGPPRPL RRFFQGLDPR GTASLFLDAV CIGEQTVNNE DCFVLKVETP ADILKAQCSP NTEVIHHTVW GYFSQRTGLL
301: VKFGDTKLVR VKSARGKSDG VFWETSMESI IDDYKYVDSV NIAHGGRTLT TLYRYGGAVN HRRRIEEKWT IEEVDFNICG LCLESFLPPS DMNNDH

Best Arabidopsis Sequence Match ( AT1G75160.1 )
(BLAST)

001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT1G75160]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.