Factsheet for HORVU3Hr1G073950.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G333900.1	Wheat	cytosol	85.65	96.1
TraesCS3A01G302500.1	Wheat	cytosol	85.42	96.09
TraesCS3D01G299300.1	Wheat	cytosol	84.95	95.57
Zm00001d012676_P001	Maize	cytosol	78.94	89.27
OQU89854	Sorghum	cytosol	78.7	88.54
EES03659	Sorghum	cytosol	78.24	88.02
Zm00001d043364_P001	Maize	mitochondrion	23.61	84.3
GSMUA_Achr4P27870_001	Banana	cytosol	69.21	78.68
GSMUA_Achr2P13560_001	Banana	cytosol	64.58	74.01
VIT_18s0001g12320.t01	Wine grape	cytosol	51.62	59.95
VIT_04s0023g01510.t01	Wine grape	cytosol	49.54	58.95
AT5G66740.1	Thale cress	cytosol	49.31	57.57
CDY53851	Canola	cytosol	48.84	57.18
Bra012096.1-P	Field mustard	cytosol	48.84	57.18
CDY30758	Canola	cytosol	48.84	57.18
CDY49838	Canola	cytosol	48.84	57.18
CDY52160	Canola	cytosol	48.84	57.18
Bra023074.1-P	Field mustard	plastid	43.98	55.88
CDY68684	Canola	cytosol, mitochondrion	36.81	55.59
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	47.45	54.96
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	47.45	54.96
PGSC0003DMT400036213	Potato	cytosol	32.18	54.72
KRH05801	Soybean	cytosol	47.45	53.25
KRH50361	Soybean	cytosol	46.99	53.14
KRH51867	Soybean	cytosol	46.99	53.14
KRH28651	Soybean	cytosol	46.3	52.91
KRH76791	Soybean	cytosol	45.6	52.67
CDX68146	Canola	cytosol	45.83	52.38
Bra008179.1-P	Field mustard	cytosol	46.76	51.01
CDY37259	Canola	cytosol	46.53	50.76
CDY46011	Canola	cytosol	46.53	50.76
AT1G75160.1	Thale cress	cytosol	46.3	50.63
Bra003768.1-P	Field mustard	cytosol	46.3	50.51
Solyc07g022840.1.1	Tomato	cytosol	43.52	50.4
PGSC0003DMT400013218	Potato	cytosol	44.91	50.13
Solyc04g080220.2.1	Tomato	cytosol	43.98	49.1
HORVU4Hr1G060590.5	Barley	mitochondrion	50.23	43.4
HORVU5Hr1G018870.3	Barley	cytosol, mitochondrion	38.43	36.09
HORVU4Hr1G013190.8	Barley	mitochondrion	35.65	30.5
Bra031821.1-P	Field mustard	cytosol	48.38	27.9

Protein Annotations

EnsemblPlants:HORVU3Hr1G073950.2	EnsemblPlantsGene:HORVU3Hr1G073950	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4	PFAM:PF04788
SEG:seg	UniParc:UPI000B47DC96	UniProt:A0A287LNE7	MapMan:27.4.5.3	:	:

Description

No Description!

Coordinates

chrchr3H:+:556527376..556529069

Molecular Weight (calculated)

47177.3 Da

IEP (calculated)

8.330

GRAVY (calculated)

-0.249

Length

432 amino acids

Sequence
(BLAST)

001: YPVLSSLPSF LPPPCFSPSL PLACLSRTAR RASCSRWPVG IDAVGGRVMR KLCPNHDRDD SLDTVLEVPI PDEMLANAPG ADKRRGGGAS MRAWLKTQAF
101: DRATAEGPAA AAANAELQLF LNVVGSPLIP CPVPHDRAFS RSIRDSSIQA STAKYIMQQY IAATGGQAAL QGLRSMYAVG KVKMCASEFH LGDQTVTAAQ
201: GRAEVGGFVL WQKCPEVWYF EIIMAGHKMS AGSDGKVAWR QSAAEVSHVS RGPPRPLRRS LQGLDPRSIA NLFSDAVCIG EKVINGEECF ILKLEASAAT
301: LRARSAAAFD IIHHTVWGYF SQRTGLLIQL EDNHLLRMKS GKGARRSENI FWETSMESVI NNYRHIDGVN IAHGGKTTVT LFRYGEGSVN HKRKLEETWT
401: VEEADFNLYG LSSDHFLPPS DLKKEGDDQH AG

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.