Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012096.1-P | Field mustard | cytosol | 99.73 | 99.73 |
| CDY30758 | Canola | cytosol | 99.73 | 99.73 |
| Bra023074.1-P | Field mustard | plastid | 91.6 | 99.41 |
| AT5G66740.1 | Thale cress | cytosol | 96.21 | 95.95 |
| CDY49838 | Canola | cytosol | 93.5 | 93.5 |
| CDY52160 | Canola | cytosol | 93.22 | 93.22 |
| VIT_04s0023g01510.t01 | Wine grape | cytosol | 74.25 | 75.48 |
| KRH28651 | Soybean | cytosol | 74.25 | 72.49 |
| KRH76791 | Soybean | cytosol | 73.44 | 72.46 |
| PGSC0003DMT400038589 | Potato | cytosol, nucleus, peroxisome | 71.82 | 71.05 |
| Solyc02g085490.1.1 | Tomato | cytosol, nucleus, peroxisome | 71.54 | 70.78 |
| GSMUA_Achr4P27870_001 | Banana | cytosol | 62.06 | 60.26 |
| CDY68684 | Canola | cytosol, mitochondrion | 45.53 | 58.74 |
| GSMUA_Achr2P13560_001 | Banana | cytosol | 58.54 | 57.29 |
| Zm00001d012676_P001 | Maize | cytosol | 57.45 | 55.5 |
| TraesCS3A01G302500.1 | Wheat | cytosol | 57.72 | 55.47 |
| CDX68146 | Canola | cytosol | 56.64 | 55.29 |
| OQU89854 | Sorghum | cytosol | 57.45 | 55.21 |
| TraesCS3B01G333900.1 | Wheat | cytosol | 57.45 | 55.06 |
| TraesCS3D01G299300.1 | Wheat | cytosol | 57.18 | 54.95 |
| EES03659 | Sorghum | cytosol | 56.64 | 54.43 |
| CDY37259 | Canola | cytosol | 57.18 | 53.28 |
| CDY46011 | Canola | cytosol | 57.18 | 53.28 |
| Zm00001d043364_P001 | Maize | mitochondrion | 16.53 | 50.41 |
| HORVU3Hr1G073950.2 | Barley | plastid | 57.18 | 48.84 |
| CDX70123 | Canola | cytosol | 54.2 | 45.15 |
| CDX98870 | Canola | cytosol | 54.2 | 45.05 |
| CDY02955 | Canola | cytosol, nucleus, plastid | 43.9 | 40.1 |
| CDY27272 | Canola | cytosol, nucleus, plastid | 47.15 | 40.09 |
| CDX76076 | Canola | cytosol, nucleus, plastid | 43.36 | 39.6 |
| CDY50147 | Canola | mitochondrion | 45.53 | 38.27 |
| CDX95439 | Canola | mitochondrion | 44.72 | 37.93 |
| CDY67693 | Canola | mitochondrion | 44.72 | 36.34 |
| CDY46168 | Canola | mitochondrion | 44.72 | 36.18 |
| CDY16530 | Canola | plastid | 43.09 | 35.18 |
| CDX79318 | Canola | cytosol | 8.13 | 34.88 |
| CDY55767 | Canola | cytosol | 34.69 | 34.78 |
| CDX81011 | Canola | cytosol | 34.69 | 34.78 |
| CDY32838 | Canola | plastid | 42.55 | 34.51 |
| CDX88540 | Canola | mitochondrion | 38.21 | 33.81 |
| CDX87382 | Canola | mitochondrion | 38.21 | 33.81 |
| CDY03939 | Canola | cytosol | 9.49 | 29.66 |
| CDX90103 | Canola | mitochondrion, plastid | 39.84 | 28.99 |
| CDY67976 | Canola | mitochondrion, plastid | 39.84 | 28.99 |
Protein Annotations
| EnsemblPlants:CDY53851 | EnsemblPlantsGene:GSBRNA2T00011545001 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF9 | PFAM:PF04788 |
| ProteinID:CDY53851 | ProteinID:CDY53851.1 | UniParc:UPI0004EDFB20 | UniProt:A0A078IV82 | MapMan:27.4.5.3 | : |
Description
BnaA07g37460DBnaA07g37460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IV82]
Coordinates
chrLK033243:-:35278..36552
Molecular Weight (calculated)
41217.2 Da
IEP (calculated)
6.596
GRAVY (calculated)
-0.295
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNPALRCQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDSSIQAST
101: AKYIVQQYIA ATGGPAALNA VNSMCVTGQV KMTASEFHQG DESVGNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGSNFEII HHTIWGYFSQ RSGLLIQFED SRLLSMRTKD GDVFWETSAE
301: SVMDDYRYVD NVNIAHGGIT SVTVFRYGEA SANHRRQMTE KWRIEEVDFN VWGLSVDHFR PPANLKIGK
101: AKYIVQQYIA ATGGPAALNA VNSMCVTGQV KMTASEFHQG DESVGNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGSNFEII HHTIWGYFSQ RSGLLIQFED SRLLSMRTKD GDVFWETSAE
301: SVMDDYRYVD NVNIAHGGIT SVTVFRYGEA SANHRRQMTE KWRIEEVDFN VWGLSVDHFR PPANLKIGK
001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.