Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400038589 Potato cytosol, nucleus, peroxisome 98.66 98.66
VIT_04s0023g01510.t01 Wine grape cytosol 72.12 74.1
AT5G66740.1 Thale cress cytosol 71.85 72.43
Bra012096.1-P Field mustard cytosol 70.78 71.54
CDY30758 Canola cytosol 70.78 71.54
CDY53851 Canola cytosol 70.78 71.54
Bra023074.1-P Field mustard plastid 64.61 70.88
CDY49838 Canola cytosol 69.71 70.46
CDY52160 Canola cytosol 69.44 70.19
KRH76791 Soybean cytosol 69.44 69.25
KRH28651 Soybean cytosol 68.9 67.99
GSMUA_Achr4P27870_001 Banana cytosol 58.71 57.63
Solyc07g022840.1.1 Tomato cytosol 55.23 55.23
GSMUA_Achr2P13560_001 Banana cytosol 55.23 54.64
TraesCS3A01G302500.1 Wheat cytosol 56.03 54.43
Zm00001d012676_P001 Maize cytosol 55.5 54.19
TraesCS3B01G333900.1 Wheat cytosol 55.76 54.03
TraesCS3D01G299300.1 Wheat cytosol 55.5 53.91
OQU89854 Sorghum cytosol 55.23 53.65
EES03659 Sorghum cytosol 54.96 53.39
Zm00001d043364_P001 Maize mitochondrion 17.16 52.89
Solyc04g080220.2.1 Tomato cytosol 53.35 51.42
HORVU3Hr1G073950.2 Barley plastid 54.96 47.45
Solyc03g078650.2.1 Tomato cytosol, nucleus, plastid 51.74 45.95
Solyc05g052860.2.1 Tomato cytosol 52.01 43.79
Solyc03g051920.2.1 Tomato cytosol 33.51 35.41
Bra031821.1-P Field mustard cytosol 69.17 34.45
Solyc01g107350.2.1 Tomato plastid 42.09 33.4
Solyc04g078190.2.1 Tomato nucleus, plastid 22.25 28.33
Protein Annotations
EnsemblPlants:Solyc02g085490.1.1EnsemblPlantsGene:Solyc02g085490.1InterPro:DUF620PANTHER:PTHR31300PANTHER:PTHR31300:SF9PFAM:PF04788
ProteinID:AAG01120.1UniParc:UPI00000A79A1UniProt:Q9FYX1MapMan:27.4.5.3::
Description
BAC19.5 [Source:UniProtKB/TrEMBL;Acc:Q9FYX1]
Coordinates
chr2:-:48359094..48360475
Molecular Weight (calculated)
42155.2 Da
IEP (calculated)
6.998
GRAVY (calculated)
-0.375
Length
373 amino acids
Sequence
(BLAST)
001: MRILCPNVDK EDGLETVLEV PIPDEMFKSM GSNAALRWQN MATWMKAQTS DKWSSPIVAA RYNELSFLLY MVGSPLIPFQ IQLGQSVNRP VKHSSIEAST
101: AKYILQQYIA ATGGQPALNA VNSMCVIGHV KISGSDFHQG DQSVKVRKSD ENGGFVLWQK NPDLWCLELL ISGCKVISGS NGKISWRQSS NQIRPISKGP
201: PRPLRRFLQG LDPRSISNLF ANAVCIGEKI INEEDCFILK LDTNQAALEA QSGPNYEILH HTIWGYFSQR SGLMIKFEDS RLLTVKTSRD DEGVFWETST
301: ESVMEDYKHV EGVNVAHSGK TFVTVFRYGE HSANHKRQLE ERWKIEEVDF NVGRLTTDFF MPPSDFDKER SRV
Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)
001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.