Factsheet for Solyc07g022840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036213	Potato	cytosol	62.2	91.34
Solyc04g080220.2.1	Tomato	cytosol	69.17	66.67
VIT_18s0001g12320.t01	Wine grape	cytosol	61.39	61.56
CDY68684	Canola	cytosol, mitochondrion	45.84	59.79
KRH50361	Soybean	cytosol	58.71	57.33
KRH51867	Soybean	cytosol	58.45	57.07
KRH05801	Soybean	cytosol	57.1	55.32
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	55.23	55.23
CDX68146	Canola	cytosol	54.96	54.23
Bra003768.1-P	Field mustard	cytosol	56.3	53.03
Bra008179.1-P	Field mustard	cytosol	56.3	53.03
CDY37259	Canola	cytosol	56.03	52.78
CDY46011	Canola	cytosol	56.03	52.78
GSMUA_Achr4P27870_001	Banana	cytosol	53.62	52.63
AT1G75160.1	Thale cress	cytosol	55.5	52.41
Zm00001d043364_P001	Maize	mitochondrion	16.89	52.07
GSMUA_Achr2P13560_001	Banana	cytosol	52.28	51.72
TraesCS3A01G302500.1	Wheat	cytosol	51.21	49.74
TraesCS3B01G333900.1	Wheat	cytosol	50.94	49.35
TraesCS3D01G299300.1	Wheat	cytosol	50.67	49.22
Zm00001d012676_P001	Maize	cytosol	50.13	48.95
OQU89854	Sorghum	cytosol	49.87	48.44
EES03659	Sorghum	cytosol	49.87	48.44
Solyc03g078650.2.1	Tomato	cytosol, nucleus, plastid	50.67	45.0
HORVU3Hr1G073950.2	Barley	plastid	50.4	43.52
Solyc05g052860.2.1	Tomato	cytosol	50.94	42.89
Solyc03g051920.2.1	Tomato	cytosol	32.98	34.84
Solyc01g107350.2.1	Tomato	plastid	39.95	31.7
Solyc04g078190.2.1	Tomato	nucleus, plastid	20.91	26.62

Protein Annotations

EnsemblPlants:Solyc07g022840.1.1	EnsemblPlantsGene:Solyc07g022840.1	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4	PFAM:PF04788
SEG:seg	UniParc:UPI000276ABDE	UniProt:K4CD41	MapMan:27.4.5.3	:	:

Description

No Description!

Coordinates

chr7:+:22795953..22797361

Molecular Weight (calculated)

41956.0 Da

IEP (calculated)

5.721

GRAVY (calculated)

-0.228

Length

373 amino acids

Sequence
(BLAST)

001: MRTLCPNFDK KNGLETVLEI PIPEEMFEKF SSNGNGALQW KNMSNLMSTQ ITDKYSSQHA ALDQFMFLFK IVGSALVPFQ VQFDPTVKLP LKEDSTAKYI
101: VQQYVAACGG QAALNSVNSM CAVGKVKMST LDMHKSGSNN NSICHCEVGG FVLWQKNLDQ WVLELVVSGC KVIAGSNGKV AWSQSSSNSC ASKGPPRPLR
201: RFFQGLDPRS TANLFSNAIC FGEKTIKDEE CFILKFESSI EMLKAQSTTN TEVVHHTIWG YFSQRTGLLV QFEDTKLVRL KTTKGDSNVF WETSMESFLE
301: DYRYIEGINV AHSGKTAATI FRYGKNIDYR AKIEETWFIE EIDFNIFGLS MECFLPPSDV NKETEFEDQL ISC

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.