Factsheet for Bra003768.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68146	Canola	cytosol	95.2	99.74
Bra008179.1-P	Field mustard	cytosol	95.96	95.96
AT1G75160.1	Thale cress	cytosol	93.69	93.92
VIT_18s0001g12320.t01	Wine grape	cytosol	63.64	67.74
KRH05801	Soybean	cytosol	60.86	62.6
KRH51867	Soybean	cytosol	59.85	62.04
KRH50361	Soybean	cytosol	59.6	61.78
PGSC0003DMT400036213	Potato	cytosol	37.88	59.06
Bra012096.1-P	Field mustard	cytosol	54.04	57.99
PGSC0003DMT400013218	Potato	cytosol	56.06	57.36
Solyc04g080220.2.1	Tomato	cytosol	55.56	56.85
Solyc07g022840.1.1	Tomato	cytosol	53.03	56.3
Bra023074.1-P	Field mustard	plastid	48.23	56.18
GSMUA_Achr4P27870_001	Banana	cytosol	53.28	55.53
GSMUA_Achr2P13560_001	Banana	cytosol	52.78	55.44
Zm00001d043364_P001	Maize	mitochondrion	16.92	55.37
Zm00001d012676_P001	Maize	cytosol	51.26	53.14
TraesCS3B01G333900.1	Wheat	cytosol	51.52	52.99
OQU89854	Sorghum	cytosol	51.26	52.86
TraesCS3D01G299300.1	Wheat	cytosol	51.26	52.86
TraesCS3A01G302500.1	Wheat	cytosol	51.26	52.86
EES03659	Sorghum	cytosol	50.76	52.34
HORVU3Hr1G073950.2	Barley	plastid	50.51	46.3
Bra009139.1-P	Field mustard	cytosol	48.99	43.69
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	46.46	42.4
Bra014725.1-P	Field mustard	nucleus	44.7	41.16
Bra038214.1-P	Field mustard	mitochondrion, plastid	39.14	33.77
Bra035117.1-P	Field mustard	mitochondrion	35.1	33.33
Bra005901.1-P	Field mustard	cytosol	30.05	32.34
Bra022430.1-P	Field mustard	mitochondrion, plastid	38.13	32.2
Bra014219.1-P	Field mustard	plastid	36.36	29.51
Bra031821.1-P	Field mustard	cytosol	52.27	27.64
Bra010924.1-P	Field mustard	mitochondrion, plastid	35.61	26.4

Protein Annotations

EnsemblPlants:Bra003768.1	EnsemblPlants:Bra003768.1-P	EnsemblPlantsGene:Bra003768	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF4
PFAM:PF04788	SEG:seg	UniParc:UPI0002541639	UniProt:M4CHT5	MapMan:27.4.5.3	:

Description

AT1G75160 (E=3e-194) | unknown protein

Coordinates

chrA07:-:14986830..14989057

Molecular Weight (calculated)

43731.6 Da

IEP (calculated)

7.211

GRAVY (calculated)

-0.170

Length

396 amino acids

Sequence
(BLAST)

001: MKMRKLCPNL DDEDGLETVL EVPVPEEMFT KMGSNATGRW RNMHALMKAH AVVTAVAADM RTPASSSSMS NVNMHMQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NVPSIEASTA KYIVQQYVAA CGGPAALNAV KSMYAVGQVR MQGSGMVAGE DEGITATPVR LGKGNFEVGG FVLWQKNPNL WFLELVVSGF
201: KISAGSDGKV AWNQSSTQPS QAHRGPPRPL RRFFQGLDPR CTASLFLDAV CIGEQTINGE DCFVLKVETP ADILKAQCSA NTEVIHHTVW GYFSQRTGLL
301: VKFGDTKLVR VRSARGKNDG VFWETSMESI IDDYMYVDSV NIAHGGRTLT TLYRYGGAVN HRRRIEEKWR IEEVDFNICG LCLESFLPPS DMNNDR

Best Arabidopsis Sequence Match ( AT1G75160.1 )
(BLAST)

001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT1G75160]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.