Factsheet for Bra023074.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012096.1-P	Field mustard	cytosol	99.71	91.87
CDY53851	Canola	cytosol	99.41	91.6
CDY30758	Canola	cytosol	99.12	91.33
AT5G66740.1	Thale cress	cytosol	96.18	88.38
VIT_04s0023g01510.t01	Wine grape	cytosol	73.24	68.59
KRH28651	Soybean	cytosol	74.12	66.67
KRH76791	Soybean	cytosol	73.24	66.58
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	71.18	64.88
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	70.88	64.61
GSMUA_Achr4P27870_001	Banana	cytosol	60.88	54.47
GSMUA_Achr2P13560_001	Banana	cytosol	56.76	51.19
Zm00001d043364_P001	Maize	mitochondrion	17.94	50.41
Zm00001d012676_P001	Maize	cytosol	56.18	50.0
TraesCS3A01G302500.1	Wheat	cytosol	56.47	50.0
OQU89854	Sorghum	cytosol	56.18	49.74
TraesCS3B01G333900.1	Wheat	cytosol	56.18	49.61
TraesCS3D01G299300.1	Wheat	cytosol	55.88	49.48
EES03659	Sorghum	cytosol	55.29	48.96
Bra003768.1-P	Field mustard	cytosol	56.18	48.23
Bra008179.1-P	Field mustard	cytosol	55.59	47.73
HORVU3Hr1G073950.2	Barley	plastid	55.88	43.98
Bra031821.1-P	Field mustard	cytosol	92.65	42.06
Bra009139.1-P	Field mustard	cytosol	52.06	39.86
Bra007185.1-P	Field mustard	cytosol, nucleus, plastid	45.0	35.25
Bra014725.1-P	Field mustard	nucleus	44.41	35.12
Bra038214.1-P	Field mustard	mitochondrion, plastid	46.47	34.42
Bra022430.1-P	Field mustard	mitochondrion, plastid	46.76	33.9
Bra005901.1-P	Field mustard	cytosol	35.59	32.88
Bra035117.1-P	Field mustard	mitochondrion	40.29	32.85
Bra014219.1-P	Field mustard	plastid	45.0	31.35
Bra010924.1-P	Field mustard	mitochondrion, plastid	43.82	27.9

Protein Annotations

EnsemblPlants:Bra023074.1	EnsemblPlants:Bra023074.1-P	EnsemblPlantsGene:Bra023074	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF9
PFAM:PF04788	UniParc:UPI000253FF1C	UniProt:M4E2S3	MapMan:27.4.5.3	:	:

Description

AT5G66740 (E=6e-190) | unknown protein

Coordinates

chrA03:-:8539968..8541411

Molecular Weight (calculated)

37986.3 Da

IEP (calculated)

7.529

GRAVY (calculated)

-0.261

Length

340 amino acids

Sequence
(BLAST)

001: MGNNVALRCQ NMMTWMKAQT SDKWSQPLIA ARINELRFLL YLVGSPLIPL QVQVGHSVHK PVKDSSIQAS TAKYIVQQYI AATGGPAALN AVNSMCVTGQ
101: VKMTASEFHQ GDESVGNLKS NDEMGGFVLW QKDPDLWCLE LVVSGCKVIC GSNGRLSWRH SSNQQTPAST GTPRPLRRFL QGLDPRSTAN LFLDATCIGE
201: KIINGEDCFI LKLETSPAVR EAQSGLNFEI IHHTIWGYFS QRSGLLIQFE DSRLLSMRTK DGDVFWETSA ESVMDDYRYV DNVNIAHGGI TSVTVFRYGE
301: ASANHRRQMT EKWRIEEVDF NVWGLSVDHF RPPANLKIGK

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.