CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28651	Soybean	cytosol	93.58	92.59
AT5G66740.1	Thale cress	cytosol	73.8	74.59
Bra012096.1-P	Field mustard	cytosol	72.46	73.44
CDY53851	Canola	cytosol	72.46	73.44
Bra023074.1-P	Field mustard	plastid	66.58	73.24
CDY30758	Canola	cytosol	72.19	73.17
CDY52160	Canola	cytosol	71.66	72.63
CDY49838	Canola	cytosol	71.39	72.36
VIT_04s0023g01510.t01	Wine grape	cytosol	70.05	72.18
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	69.25	69.44
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	69.25	69.44
GSMUA_Achr4P27870_001	Banana	cytosol	58.02	57.11
GSMUA_Achr2P13560_001	Banana	cytosol	56.42	55.97
KRH51867	Soybean	cytosol	55.35	54.19
KRH50361	Soybean	cytosol	55.08	53.93
Zm00001d012676_P001	Maize	cytosol	53.48	52.36
KRH05801	Soybean	cytosol	53.48	51.95
OQU89854	Sorghum	cytosol	52.67	51.3
EES03659	Sorghum	cytosol	52.67	51.3
TraesCS3A01G302500.1	Wheat	cytosol	52.41	51.04
TraesCS3B01G333900.1	Wheat	cytosol	52.41	50.91
TraesCS3D01G299300.1	Wheat	cytosol	52.14	50.78
Zm00001d043364_P001	Maize	mitochondrion	16.31	50.41
HORVU3Hr1G073950.2	Barley	plastid	52.67	45.6
KRH73113	Soybean	cytosol	49.47	43.63
KRH15018	Soybean	cytosol	49.73	43.56
KRG97798	Soybean	cytosol	50.0	42.6
KRH31070	Soybean	cytosol	49.47	42.43
Bra031821.1-P	Field mustard	cytosol	71.12	35.51
KRH43665	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	35.83	34.81
KRH13789	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	35.29	34.38
KRH68081	Soybean	cytosol	32.62	34.17
KRG96347	Soybean	cytosol	32.09	33.99
KRH71794	Soybean	cytosol	32.35	33.43
KRG91072	Soybean	plastid	41.18	33.26
KRH35700	Soybean	plastid	40.91	33.12
KRH38019	Soybean	peroxisome	31.55	32.69
KRH05611	Soybean	plastid	39.84	31.3
KRH15430	Soybean	plastid	39.57	31.29

Protein Annotations

EMBL:ACUP02000642	EnsemblPlants:KRH76791	EnsemblPlantsGene:GLYMA_01G174600	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF9
PFAM:PF04788	ProteinID:KRH76791	ProteinID:KRH76791.1	UniParc:UPI00023BDFAC	UniProt:I1J8V0	MapMan:27.4.5.3

Description

hypothetical protein

Coordinates

chr1:+:51138625..51140874

Molecular Weight (calculated)

42154.1 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.363

Length

374 amino acids

Sequence
(BLAST)

001: MKQPAAKSSL RRLCPNIGKE DGLETVLEIP IPEEMFSSMG SNVNLRWQNM LAWMKAQTED KLSTPTVASR LNELRFLLYL VGSPVIPLQV QLGHSVHRPV
101: RDCSIEASTA KYIVQQYIAA TGGQPALNAV DSMCVTGQIK ISASDFHLNH TNETIEVKKT SEEMGGFVLW QKDPDLWCLE LLVSGCKVCC GSNGKVSWRH
201: SSNQQTPVSR NAPRPLRRFL QGLDPRATAN LFLDAACIGE KIINDEECFI LKLETSPAIR DAQSGPNFEI IHHTIWGYFS QRSGLLVQFE DSRLHTTRTK
301: DDNDIFWQTS LESVIEDYKY VDGINVSHSG KTRVTVSRYG EQSANHKREL EERWKIEEVD FNIWGLNAES FLAP

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.