Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49838 | Canola | cytosol | 98.92 | 98.92 |
| CDY53851 | Canola | cytosol | 93.22 | 93.22 |
| CDY30758 | Canola | cytosol | 92.95 | 92.95 |
| AT5G66740.1 | Thale cress | cytosol | 92.68 | 92.43 |
| VIT_04s0023g01510.t01 | Wine grape | cytosol | 74.53 | 75.76 |
| KRH28651 | Soybean | cytosol | 73.44 | 71.69 |
| KRH76791 | Soybean | cytosol | 72.63 | 71.66 |
| PGSC0003DMT400038589 | Potato | cytosol, nucleus, peroxisome | 70.46 | 69.71 |
| Solyc02g085490.1.1 | Tomato | cytosol, nucleus, peroxisome | 70.19 | 69.44 |
| GSMUA_Achr4P27870_001 | Banana | cytosol | 60.98 | 59.21 |
| CDY68684 | Canola | cytosol, mitochondrion | 44.72 | 57.69 |
| GSMUA_Achr2P13560_001 | Banana | cytosol | 57.45 | 56.23 |
| Zm00001d012676_P001 | Maize | cytosol | 56.91 | 54.97 |
| TraesCS3A01G302500.1 | Wheat | cytosol | 56.91 | 54.69 |
| TraesCS3B01G333900.1 | Wheat | cytosol | 56.91 | 54.55 |
| TraesCS3D01G299300.1 | Wheat | cytosol | 56.64 | 54.43 |
| OQU89854 | Sorghum | cytosol | 56.64 | 54.43 |
| CDX68146 | Canola | cytosol | 55.28 | 53.97 |
| EES03659 | Sorghum | cytosol | 56.1 | 53.91 |
| CDY37259 | Canola | cytosol | 56.1 | 52.27 |
| CDY46011 | Canola | cytosol | 56.1 | 52.27 |
| Zm00001d043364_P001 | Maize | mitochondrion | 16.26 | 49.59 |
| HORVU3Hr1G073950.2 | Barley | plastid | 57.18 | 48.84 |
| Bra031821.1-P | Field mustard | cytosol | 97.83 | 48.2 |
| CDX70123 | Canola | cytosol | 52.85 | 44.02 |
| CDX98870 | Canola | cytosol | 52.85 | 43.92 |
| CDY02955 | Canola | cytosol, nucleus, plastid | 43.9 | 40.1 |
| CDY27272 | Canola | cytosol, nucleus, plastid | 46.61 | 39.63 |
| CDX76076 | Canola | cytosol, nucleus, plastid | 43.36 | 39.6 |
| CDY50147 | Canola | mitochondrion | 45.26 | 38.04 |
| CDX95439 | Canola | mitochondrion | 44.44 | 37.7 |
| CDY67693 | Canola | mitochondrion | 44.44 | 36.12 |
| CDY46168 | Canola | mitochondrion | 44.44 | 35.96 |
| CDY16530 | Canola | plastid | 42.55 | 34.73 |
| CDY32838 | Canola | plastid | 42.01 | 34.07 |
| CDX81011 | Canola | cytosol | 33.33 | 33.42 |
| CDY55767 | Canola | cytosol | 33.33 | 33.42 |
| CDX88540 | Canola | mitochondrion | 37.13 | 32.85 |
| CDX87382 | Canola | mitochondrion | 37.13 | 32.85 |
| CDX79318 | Canola | cytosol | 7.59 | 32.56 |
| CDY03939 | Canola | cytosol | 9.49 | 29.66 |
| CDY67976 | Canola | mitochondrion, plastid | 39.57 | 28.8 |
| CDX90103 | Canola | mitochondrion, plastid | 39.57 | 28.8 |
Protein Annotations
| EnsemblPlants:CDY52160 | EnsemblPlantsGene:GSBRNA2T00004994001 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF9 | PFAM:PF04788 |
| ProteinID:CDY52160 | ProteinID:CDY52160.1 | UniParc:UPI0004EDC555 | UniProt:A0A078IM54 | MapMan:27.4.5.3 | : |
Description
BnaA02g34690DBnaA02g34690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM54]
Coordinates
chrLK033060:-:70641..72045
Molecular Weight (calculated)
41318.4 Da
IEP (calculated)
6.051
GRAVY (calculated)
-0.260
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLCPNVDR DDGLETVLEI PIPEELFSGM GNNVALRCQN MMTWMKAQTA DKLSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDSSIQAST
101: AKYIVQQYIA ATGGPAALNA VNSMCVIGQV KMTASEFHQG DDSNVNLKSN DEMGGFILWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPSSTG
201: TPRPLRRFLQ GLDPRSTANM FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPEFEII HHTIWGYFSQ RSGLLIQFED SRLLSMRTKE GDVFWETSAE
301: SVMDDYRYVD DVNIAHGGKT TVTVFRYGEA SANHRRQMTE KWRIEEVDFN IWGLSVDHFR PPAFLLTGN
101: AKYIVQQYIA ATGGPAALNA VNSMCVIGQV KMTASEFHQG DDSNVNLKSN DEMGGFILWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPSSTG
201: TPRPLRRFLQ GLDPRSTANM FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPEFEII HHTIWGYFSQ RSGLLIQFED SRLLSMRTKE GDVFWETSAE
301: SVMDDYRYVD DVNIAHGGKT TVTVFRYGEA SANHRRQMTE KWRIEEVDFN IWGLSVDHFR PPAFLLTGN
001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.