Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 6
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G19540.1 | CDY00332 | AT5G62880.1 | 21798944 |
| AT3G19540.1 | CDY30738 | AT5G62880.1 | 21798944 |
| AT3G19540.1 | CDY45748 | AT5G62880.1 | 21798944 |
| AT3G19540.1 | CDY56740 | AT5G62880.1 | 21798944 |
| AT3G19540.1 | CDY68200 | AT5G62880.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX95439 | Canola | mitochondrion | 97.04 | 97.93 |
| Bra038214.1-P | Field mustard | mitochondrion, plastid | 99.54 | 95.21 |
| CDY46168 | Canola | mitochondrion | 89.75 | 86.4 |
| CDY67693 | Canola | mitochondrion | 89.29 | 86.34 |
| AT3G19540.1 | Thale cress | plastid | 92.48 | 83.71 |
| CDY16530 | Canola | plastid | 75.63 | 73.45 |
| KRG91072 | Soybean | plastid | 76.31 | 72.35 |
| CDY32838 | Canola | plastid | 74.94 | 72.31 |
| KRH35700 | Soybean | plastid | 76.08 | 72.29 |
| PGSC0003DMT400066530 | Potato | plastid | 77.22 | 72.13 |
| Solyc01g107350.2.1 | Tomato | plastid | 76.77 | 71.7 |
| VIT_03s0091g00410.t01 | Wine grape | plastid | 77.22 | 71.37 |
| GSMUA_Achr4P14230_001 | Banana | cytosol, mitochondrion, nucleus, peroxisome | 71.07 | 68.12 |
| GSMUA_Achr3P02230_001 | Banana | cytosol, plastid | 47.38 | 67.75 |
| GSMUA_Achr4P32590_001 | Banana | cytosol | 69.25 | 67.26 |
| GSMUA_Achr6P16820_001 | Banana | cytosol | 66.74 | 66.44 |
| OQU79433 | Sorghum | cytosol | 66.29 | 64.81 |
| GSMUA_Achr10P... | Banana | cytosol | 56.95 | 64.27 |
| TraesCS5B01G078600.2 | Wheat | cytosol | 62.87 | 64.19 |
| GSMUA_Achr10P... | Banana | plastid | 61.05 | 63.96 |
| HORVU5Hr1G018870.3 | Barley | cytosol, mitochondrion | 66.97 | 63.91 |
| GSMUA_Achr7P00620_001 | Banana | mitochondrion | 59.23 | 63.88 |
| Os03t0606100-01 | Rice | cytosol | 63.78 | 63.64 |
| TraesCS5D01G085100.1 | Wheat | cytosol | 66.97 | 63.5 |
| TraesCS4D01G076200.1 | Wheat | cytosol, mitochondrion | 66.06 | 63.46 |
| TraesCS4A01G237300.1 | Wheat | cytosol, mitochondrion | 65.83 | 63.24 |
| TraesCS4B01G077800.1 | Wheat | cytosol | 65.83 | 63.24 |
| GSMUA_Achr2P13470_001 | Banana | cytosol | 63.1 | 63.1 |
| GSMUA_Achr6P24020_001 | Banana | cytosol | 57.63 | 63.09 |
| TraesCS5A01G072300.1 | Wheat | cytosol | 66.51 | 63.07 |
| GSMUA_Achr2P21540_001 | Banana | plastid | 61.96 | 62.24 |
| Os12t0581300-01 | Rice | cytosol | 22.32 | 62.03 |
| GSMUA_Achr7P26350_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 66.51 | 60.83 |
| Zm00001d030837_P001 | Maize | cytosol, mitochondrion | 65.83 | 60.46 |
| EER91248 | Sorghum | cytosol | 63.78 | 59.96 |
| Zm00001d013746_P001 | Maize | cytosol | 61.96 | 58.75 |
| TraesCS2D01G192800.1 | Wheat | nucleus | 66.97 | 58.1 |
| Os07t0591100-01 | Rice | nucleus | 68.34 | 57.92 |
| TraesCS2B01G211900.1 | Wheat | nucleus | 66.97 | 57.76 |
| TraesCS2A01G194900.1 | Wheat | nucleus | 66.74 | 57.68 |
| OQU92347 | Sorghum | mitochondrion, plastid | 63.55 | 57.29 |
| EER99634 | Sorghum | nucleus | 66.51 | 55.94 |
| Zm00001d047324_P001 | Maize | cytosol | 62.41 | 55.92 |
| Zm00001d006749_P001 | Maize | cytosol | 65.6 | 54.75 |
| HORVU4Hr1G013190.8 | Barley | mitochondrion | 61.28 | 53.27 |
| Zm00001d016585_P002 | Maize | extracellular, plasma membrane | 30.52 | 52.96 |
| CDY03939 | Canola | cytosol | 14.12 | 52.54 |
| Zm00001d022006_P001 | Maize | cytosol, plastid | 66.51 | 52.42 |
| CDX90103 | Canola | mitochondrion, plastid | 56.49 | 48.92 |
| CDY67976 | Canola | mitochondrion, plastid | 56.26 | 48.72 |
| CDY30758 | Canola | cytosol | 38.27 | 45.53 |
| CDY53851 | Canola | cytosol | 38.27 | 45.53 |
| CDY68684 | Canola | cytosol, mitochondrion | 29.61 | 45.45 |
| CDX87382 | Canola | mitochondrion | 43.05 | 45.32 |
| CDX88540 | Canola | mitochondrion | 43.05 | 45.32 |
| CDY52160 | Canola | cytosol | 38.04 | 45.26 |
| CDY49838 | Canola | cytosol | 37.81 | 44.99 |
| CDX81011 | Canola | cytosol | 37.59 | 44.84 |
| CDY55767 | Canola | cytosol | 37.59 | 44.84 |
| CDX79318 | Canola | cytosol | 8.66 | 44.19 |
| CDX70123 | Canola | cytosol | 41.0 | 40.63 |
| CDY02955 | Canola | cytosol, nucleus, plastid | 37.36 | 40.59 |
| CDX98870 | Canola | cytosol | 41.0 | 40.54 |
| CDX68146 | Canola | cytosol | 34.85 | 40.48 |
| CDY46011 | Canola | cytosol | 36.45 | 40.4 |
| CDY37259 | Canola | cytosol | 36.45 | 40.4 |
| CDY27272 | Canola | cytosol, nucleus, plastid | 39.64 | 40.09 |
| CDX76076 | Canola | cytosol, nucleus, plastid | 36.67 | 39.85 |
Protein Annotations
| EnsemblPlants:CDY50147 | EnsemblPlantsGene:GSBRNA2T00096057001 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF1 | PFAM:PF04788 |
| ProteinID:CDY50147 | ProteinID:CDY50147.1 | SEG:seg | UniParc:UPI0004EEB77C | UniProt:A0A078IJR3 | MapMan:27.4.5.3 |
Description
BnaA01g26070DBnaA01g26070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJR3]
Coordinates
chrLK032885:-:17369..19419
Molecular Weight (calculated)
47630.6 Da
IEP (calculated)
9.078
GRAVY (calculated)
-0.421
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKQGFFSA LRGLSPSRSR TRKNFTGSGA AGGYYVTQPE LLIERSGSLR PVMEGPDPDE EEEGGGGGSV GDSKRLGSGL GNWVKGQLSR APSVAATAAH
101: RRNDLRLLLG VMGAPLAPIH VSSSDPLPHL SIKNTPIETS SAQYILQQYT AASGGQKLKS SIKNAYAMGK LKMITSEIQT ATRTVRNRNP SKAETGGFVL
201: WQMNPDMWYV ELSVGGNKVR AGCNGKLVWR HTPWLGSHTA KGPVRPLRRG LQGLDPRTTA AMFAEAKCIG EKNVNGEDCF ILKLSTDPET LKARSEGPAE
301: IIRHVLSGYF SQKTGLLVHI EDSHLTRIQS NGGDTVFWET TYNSSLDDYR QVEGVMIAHS GHSVVTLFRF GEVAMSHTRT KMEESWTIEE VAFNVPGLSL
401: DCFIPPADLK TGSVADSCEY GQEERGKAAH RAKVAALEN
101: RRNDLRLLLG VMGAPLAPIH VSSSDPLPHL SIKNTPIETS SAQYILQQYT AASGGQKLKS SIKNAYAMGK LKMITSEIQT ATRTVRNRNP SKAETGGFVL
201: WQMNPDMWYV ELSVGGNKVR AGCNGKLVWR HTPWLGSHTA KGPVRPLRRG LQGLDPRTTA AMFAEAKCIG EKNVNGEDCF ILKLSTDPET LKARSEGPAE
301: IIRHVLSGYF SQKTGLLVHI EDSHLTRIQS NGGDTVFWET TYNSSLDDYR QVEGVMIAHS GHSVVTLFRF GEVAMSHTRT KMEESWTIEE VAFNVPGLSL
401: DCFIPPADLK TGSVADSCEY GQEERGKAAH RAKVAALEN
001: MEKKQGFFSA LRHEVVRGLS PSRSRARSRS VSPARSSSPM SALTWGRKNL TGGGGGGGGG GYYLAQPEQL IGRSGSLRPV MEGPDPDEGG GGGNIGESKR
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV
Arabidopsis Description
AT3g19540/T31J18_4 [Source:UniProtKB/TrEMBL;Acc:Q9LH41]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.