Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37259 | Canola | cytosol | 100.0 | 100.0 |
| Bra008179.1-P | Field mustard | cytosol | 99.49 | 99.49 |
| CDX68146 | Canola | cytosol | 91.41 | 95.77 |
| AT1G75160.1 | Thale cress | cytosol | 94.7 | 94.94 |
| CDY68684 | Canola | cytosol, mitochondrion | 68.18 | 94.41 |
| VIT_18s0001g12320.t01 | Wine grape | cytosol | 64.39 | 68.55 |
| KRH51867 | Soybean | cytosol | 61.36 | 63.61 |
| KRH50361 | Soybean | cytosol | 61.11 | 63.35 |
| KRH05801 | Soybean | cytosol | 61.36 | 63.12 |
| PGSC0003DMT400036213 | Potato | cytosol | 37.88 | 59.06 |
| CDY53851 | Canola | cytosol | 53.28 | 57.18 |
| CDY30758 | Canola | cytosol | 53.28 | 57.18 |
| PGSC0003DMT400013218 | Potato | cytosol | 55.56 | 56.85 |
| Solyc04g080220.2.1 | Tomato | cytosol | 55.05 | 56.33 |
| Zm00001d043364_P001 | Maize | mitochondrion | 17.17 | 56.2 |
| CDY52160 | Canola | cytosol | 52.27 | 56.1 |
| CDY49838 | Canola | cytosol | 52.27 | 56.1 |
| Solyc07g022840.1.1 | Tomato | cytosol | 52.78 | 56.03 |
| GSMUA_Achr2P13560_001 | Banana | cytosol | 53.03 | 55.7 |
| GSMUA_Achr4P27870_001 | Banana | cytosol | 53.28 | 55.53 |
| Zm00001d012676_P001 | Maize | cytosol | 52.78 | 54.71 |
| OQU89854 | Sorghum | cytosol | 52.78 | 54.43 |
| EES03659 | Sorghum | cytosol | 52.27 | 53.91 |
| TraesCS3B01G333900.1 | Wheat | cytosol | 51.77 | 53.25 |
| TraesCS3D01G299300.1 | Wheat | cytosol | 51.52 | 53.12 |
| TraesCS3A01G302500.1 | Wheat | cytosol | 51.52 | 53.12 |
| HORVU3Hr1G073950.2 | Barley | plastid | 50.76 | 46.53 |
| CDX70123 | Canola | cytosol | 49.49 | 44.24 |
| CDX98870 | Canola | cytosol | 49.49 | 44.14 |
| CDY27272 | Canola | cytosol, nucleus, plastid | 47.47 | 43.32 |
| CDY02955 | Canola | cytosol, nucleus, plastid | 43.18 | 42.33 |
| CDX76076 | Canola | cytosol, nucleus, plastid | 42.93 | 42.08 |
| CDY50147 | Canola | mitochondrion | 40.4 | 36.45 |
| CDX95439 | Canola | mitochondrion | 39.9 | 36.32 |
| CDY67693 | Canola | mitochondrion | 38.38 | 33.48 |
| CDY46168 | Canola | mitochondrion | 38.38 | 33.33 |
| CDX87382 | Canola | mitochondrion | 34.34 | 32.61 |
| CDX88540 | Canola | mitochondrion | 34.34 | 32.61 |
| CDX79318 | Canola | cytosol | 7.07 | 32.56 |
| CDX81011 | Canola | cytosol | 30.05 | 32.34 |
| CDY55767 | Canola | cytosol | 30.05 | 32.34 |
| CDY16530 | Canola | plastid | 36.87 | 32.3 |
| CDY32838 | Canola | plastid | 36.87 | 32.09 |
| CDY03939 | Canola | cytosol | 9.09 | 30.51 |
| CDY67976 | Canola | mitochondrion, plastid | 35.1 | 27.42 |
| CDX90103 | Canola | mitochondrion, plastid | 35.1 | 27.42 |
Protein Annotations
| EnsemblPlants:CDY46011 | EnsemblPlantsGene:GSBRNA2T00083126001 | InterPro:DUF620 | PANTHER:PTHR31300 | PANTHER:PTHR31300:SF4 | PFAM:PF04788 |
| ProteinID:CDY37259.1 | ProteinID:CDY46011 | ProteinID:CDY46011.1 | SEG:seg | UniParc:UPI0004EDF6BA | UniProt:A0A078HIT5 |
| MapMan:27.4.5.3 | : | : | : | : | : |
Description
BnaA02g17150DBnaA02g17150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIT5]
Coordinates
chrLK032646:-:13588..16255
Molecular Weight (calculated)
43787.4 Da
IEP (calculated)
6.838
GRAVY (calculated)
-0.215
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMRKLCPNL DNEDGLETVL EVPVPEEMFT KMGSNATGRW RNMHALMKAH AVVTAVAADM RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPAVLNAV KSMYAVGQVR MQGSEMVAGE DEGTTTTPVR LGKGNFEVGG FVLWQKNPNL WFLELVVSGF
201: KISAGSDGKV AWNQSSTQPS QAHRGPPRPL RRFFQGLDPR CTASLFLDAV CIGEQTVNNE DCFVLKVETP ADILKAQCSP NTEVIHHTVW GYFSQRTGLL
301: VKFGDTKLVR VKSARGKSDG VFWETSMESI IDDYKYVDSV NIAHGGRTLT TLYRYGGAVN HRRRIEEKWT IEEVDFNICG LCLESFLPPS DMNNDH
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPAVLNAV KSMYAVGQVR MQGSEMVAGE DEGTTTTPVR LGKGNFEVGG FVLWQKNPNL WFLELVVSGF
201: KISAGSDGKV AWNQSSTQPS QAHRGPPRPL RRFFQGLDPR CTASLFLDAV CIGEQTVNNE DCFVLKVETP ADILKAQCSP NTEVIHHTVW GYFSQRTGLL
301: VKFGDTKLVR VKSARGKSDG VFWETSMESI IDDYKYVDSV NIAHGGRTLT TLYRYGGAVN HRRRIEEKWT IEEVDFNICG LCLESFLPPS DMNNDH
001: MKMRKLCPNL DREDGLETVL EVPVPEEMFT KMGSNAQGRW RNMHALMKAH AVVTAVATDV RTPASSSSMS NVNMHLQSKS DNEFVALLKI VGSPLIPFHV
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
101: PLEFCLSRPI NDTSIEASTA KYIVQQYVAA CGGPTALNAV KSMYAVGQVR MQGSEMVAGE DEGTGTPVRL GKGSFEVGGF VLWQKNPNLW FLELVVSGFK
201: ISAGSDGKVA WNQSSTQPSQ AHRGPPRPLR RFFQGLDPRC TASLFLDAVC IGEQPVNGED CFVLKVETPS DILKAQCSPN TEVIHHTVWG YFSQRTGLLV
301: KFGDTKLVRV KSGRGKNDGV FWETSMESII DDYIFVDAVN IAHGGQTVTT LYRYGGAVNH RRRIEEKWRI EEVDFNICGL CLESFLPPSD INNDH
Arabidopsis Description
Protein of unknown function (DUF620) [Source:TAIR;Acc:AT1G75160]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.