Factsheet for Zm00001d006749_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d006078_P001
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d012045_P001
Zm00001d015355_P001
Zm00001d018004_P002
Zm00001d021038_P001
Zm00001d028948_P001
Zm00001d031586_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d042359_P001
Zm00001d043144_P001
Zm00001d044802_P001
Zm00001d047597_P001
Zm00001d052273_P004
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27690.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT1G27690.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT1G27690.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT1G27690.1	Zm00001d006078_P001	AT3G07120.1	21798944
AT1G27690.1	Zm00001d012045_P001	AT3G07120.1	21798944
AT1G27690.1	Zm00001d021038_P001	AT3G07120.1	21798944
AT1G27690.1	Zm00001d031586_P001	AT3G07120.1	21798944
AT1G27690.1	Zm00001d042359_P001	AT3G07120.1	21798944
AT1G49840.1	Zm00001d015355_P001	AT1G21840.1	21798944
AT3G19540.1	Zm00001d018004_P002	AT5G62880.1	21798944
AT3G19540.1	Zm00001d044802_P001	AT5G62880.1	21798944
AT3G19540.1	Zm00001d052273_P004	AT5G62880.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99634	Sorghum	nucleus	88.4	89.08
TraesCS2D01G192800.1	Wheat	nucleus	82.89	86.17
TraesCS2A01G194900.1	Wheat	nucleus	82.89	85.83
TraesCS2B01G211900.1	Wheat	nucleus	82.13	84.87
Zm00001d022006_P001	Maize	cytosol, plastid	88.02	83.12
Os07t0591100-01	Rice	nucleus	81.37	82.63
Zm00001d047324_P001	Maize	cytosol	68.25	73.27
VIT_03s0091g00410.t01	Wine grape	plastid	63.5	70.32
KRG91072	Soybean	plastid	61.03	69.33
KRH35700	Soybean	plastid	60.84	69.26
Zm00001d016585_P002	Maize	extracellular, plasma membrane	33.27	69.17
PGSC0003DMT400066530	Potato	plastid	61.03	68.3
Solyc01g107350.2.1	Tomato	plastid	60.84	68.09
Zm00001d013746_P001	Maize	cytosol	59.13	67.17
KRH15430	Soybean	plastid	59.7	66.38
KRH05611	Soybean	plastid	59.89	66.18
VIT_18s0001g09450.t01	Wine grape	plastid	58.94	66.1
CDX95439	Canola	mitochondrion	54.56	65.98
PGSC0003DMT400055468	Potato	plastid	58.94	65.96
CDY50147	Canola	mitochondrion	54.75	65.6
Zm00001d030837_P001	Maize	cytosol, mitochondrion	59.13	65.06
Bra038214.1-P	Field mustard	mitochondrion, plastid	55.7	63.83
CDY67693	Canola	mitochondrion	54.75	63.44
AT3G19540.1	Thale cress	plastid	58.17	63.09
CDY46168	Canola	mitochondrion	54.56	62.94
CDY16530	Canola	plastid	53.8	62.61
Bra022430.1-P	Field mustard	mitochondrion, plastid	55.7	62.47
Solyc04g078190.2.1	Tomato	nucleus, plastid	34.22	61.43
CDY32838	Canola	plastid	53.04	61.32
Bra014219.1-P	Field mustard	plastid	55.7	60.04
AT1G49840.1	Thale cress	plastid	54.18	57.69
AT1G27690.1	Thale cress	plastid	46.96	57.04
CDY03939	Canola	cytosol	11.79	52.54
Zm00001d027816_P001	Maize	cytosol	32.7	47.65
CDY67976	Canola	mitochondrion, plastid	45.82	47.53
CDX90103	Canola	mitochondrion, plastid	45.82	47.53
Bra010924.1-P	Field mustard	mitochondrion, plastid	47.91	47.19
Zm00001d043364_P001	Maize	mitochondrion	10.46	45.45
Zm00001d047840_P001	Maize	cytosol, peroxisome, plastid	35.93	41.54
Zm00001d028565_P002	Maize	cytosol	36.12	41.3
Zm00001d012676_P001	Maize	cytosol	29.28	40.31
Zm00001d037792_P001	Maize	cytosol, nucleus, plastid	32.89	35.67

Protein Annotations

EnsemblPlants:Zm00001d006749_P001	EnsemblPlants:Zm00001d006749_T001	EnsemblPlantsGene:Zm00001d006749	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF5
PFAM:PF04788	ProteinID:ONM24908.1	SEG:seg	UniParc:UPI000843A89B	UniProt:A0A1D6F058	MapMan:27.4.5.3

Description

Lipase-like protein

Coordinates

chr2:-:215838912..215841057

Molecular Weight (calculated)

56564.0 Da

IEP (calculated)

10.189

GRAVY (calculated)

-0.276

Length

526 amino acids

Sequence
(BLAST)

001: MEKERKQGFF AALKEEVVRG LSPARTRGKS PAPRSASPAR MLIPRRRKAP AAPPPPPPPP EKVLQQYLGE QLVARSGSLL RPGGEALAPL IEGPDAERLA
101: AGDPDEEDSG HREGFGHWVR GHLTRAPSMA AAGGPDGSFR RSDLRLLLGV MGAPLAPIPS KPAEPLPLLS IKGTTIMLRS ARASGTLGLA DRTDMMQESS
201: SAQYILHQYT AASGGYKLLQ SVRNAYAMGK VRMVASEFET ATRVVKNRGP SGRGAAAVEQ GGFVLWQMAR DMWYVELAVG GSKVHAGSNG RLVWRHTPWL
301: GAHAAKGPVR PLRRVLQGLD PLTTAGLFAE ARCVGEKKVN GEECFILKLA ADPRTLKLRS EGPAEIIRHV LFGYFSQRTG LMVHIEDSHL TRIQPHAGGD
401: AVYWETTTSS ALEDYRAVEG VMVAHSGRSA VTLFRFGEAA MSHTKTRMEE AWSIEEVAFN VPGLSADCFI PPADIQSGPV GEACELPSSQ SRAKAVAVHP
501: SRVAAVDRAT AAAACRGRKT TWRVEV

Best Arabidopsis Sequence Match ( AT3G19540.1 )
(BLAST)

001: MEKKQGFFSA LRHEVVRGLS PSRSRARSRS VSPARSSSPM SALTWGRKNL TGGGGGGGGG GYYLAQPEQL IGRSGSLRPV MEGPDPDEGG GGGNIGESKR
101: LGSGLGHWVK GQLSRAPSVA ATAAYRRNDL RLLLGVMGAP LAPIHVSSSD PLPHLSIKNT PIETSSAQYI LQQYTAASGG QKLQNSIKNA YAMGKLKMIT
201: SELETATRTV RNRNPSKAET GGFVLWQMNP DMWYVELAVG GSKVRAGCNG KLVWRHTPWL GSHTAKGPVR PLRRGLQGLD PRTTAAMFAE AKCIGEKKVN
301: GEDCFILKLC TDPETLKARS EGPAEIIRHV LFGYFSQKTG LLVHIEDSHL TRIQSNGGET VFWETTYNSS LDDYRQVEGI MIAHSGHSVV TLFRFGEVAT
401: SHTRTKMEES WTIEEVAFNV PGLSLDCFIP PADLKTGSLT ESCEYPQEER GKNNTLALSA AHRAKVAALE NGSLEDHRPV WHTDV

Arabidopsis Description

AT3g19540/T31J18_4 [Source:UniProtKB/TrEMBL;Acc:Q9LH41]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.