Factsheet for Zm00001d027816_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95445	Sorghum	cytosol	97.51	95.91
Os03t0167400-00	Rice	cytosol	89.2	87.98
TraesCS4D01G281900.1	Wheat	cytosol	88.92	87.95
TraesCS4A01G020600.1	Wheat	cytosol	88.64	87.19
TraesCS4B01G282900.1	Wheat	cytosol	88.09	87.12
GSMUA_Achr3P29550_001	Banana	cytosol	61.77	62.64
KRG96347	Soybean	cytosol	48.75	49.86
KRH68081	Soybean	cytosol	49.03	49.58
Solyc03g051920.2.1	Tomato	cytosol	48.2	49.29
KRH71794	Soybean	cytosol	49.31	49.17
PGSC0003DMT400066079	Potato	cytosol	47.92	49.15
KRH38019	Soybean	peroxisome	47.92	47.92
AT5G06610.1	Thale cress	cytosol	46.54	45.65
CDX81011	Canola	cytosol	46.54	45.65
CDY55767	Canola	cytosol	46.54	45.65
Bra005901.1-P	Field mustard	cytosol	46.26	45.38
Zm00001d043364_P001	Maize	mitochondrion	14.68	43.8
Zm00001d013746_P001	Maize	cytosol	48.75	38.01
Zm00001d030837_P001	Maize	cytosol, mitochondrion	49.58	37.45
Zm00001d016585_P002	Maize	extracellular, plasma membrane	24.93	35.57
Zm00001d047324_P001	Maize	cytosol	46.81	34.49
Zm00001d012676_P001	Maize	cytosol	34.9	32.98
Zm00001d006749_P001	Maize	cytosol	47.65	32.7
Zm00001d047840_P001	Maize	cytosol, peroxisome, plastid	40.72	32.31
Zm00001d022006_P001	Maize	cytosol, plastid	49.58	32.14
Zm00001d028565_P002	Maize	cytosol	40.17	31.52
Zm00001d037792_P001	Maize	cytosol, nucleus, plastid	41.55	30.93
VIT_08s0007g07110.t01	Wine grape	cytosol	49.86	27.27

Protein Annotations

EnsemblPlants:Zm00001d027816_P001	EnsemblPlants:Zm00001d027816_T001	EnsemblPlantsGene:Zm00001d027816	EntrezGene:107548105	InterPro:DUF620	PANTHER:PTHR31300
PANTHER:PTHR31300:SF3	PFAM:PF04788	ProteinID:ONL94059.1	SEG:seg	UniParc:UPI0002214F3E	UniProt:A0A1D6JPZ0
MapMan:27.4.5.3	:	:	:	:	:

Description

No Description!

Coordinates

chr1:+:14361469..14365136

Molecular Weight (calculated)

38095.3 Da

IEP (calculated)

8.025

GRAVY (calculated)

-0.082

Length

361 amino acids

Sequence
(BLAST)

001: MKSRVALEPL AEEPGCGEED AARRRSGLHA ALHRWARLLS GGVAGDDARP AADLRVLLSV LACPLSPVPL LPRLPRHVAS SAQYIIEQFR ATTGCGKLED
101: GAVKSMYASG RVRLSMLQEP GGGGGGGRGH EGSFVLWQLA PSMWLVEMSV AGQSVAAGSD GRVAWRRTPW LGAHAARGGS RPLRRALQGL DPVTIASIFS
201: TAEHAGEKEV DGEDCFVLRL DVGPSVLSSW SDGTAEVIRH GLTGFFSQRS GLLARLEDSQ LTRIQSPGAA AMYWETTIAS AVSDYRAVDG GVAVAHAGTS
301: TAHLARFGVG VRAARVVTRM EESWTIDDVA FNVPGLGPDA FIPPEEVRRS RSYGAAIAGG K

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.