Factsheet for GSMUA_Achr3P29550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d027816_P001	Maize	cytosol	62.64	61.77
TraesCS4D01G281900.1	Wheat	cytosol	63.2	61.64
EER95445	Sorghum	cytosol	63.2	61.31
TraesCS4B01G282900.1	Wheat	cytosol	62.64	61.1
TraesCS4A01G020600.1	Wheat	cytosol	62.92	61.04
Os03t0167400-00	Rice	cytosol	62.08	60.38
KRH71794	Soybean	cytosol	55.62	54.7
Solyc03g051920.2.1	Tomato	cytosol	53.09	53.54
KRG96347	Soybean	cytosol	53.09	53.54
PGSC0003DMT400066079	Potato	cytosol	52.81	53.41
KRH38019	Soybean	peroxisome	53.93	53.19
KRH68081	Soybean	cytosol	52.81	52.66
CDX81011	Canola	cytosol	52.53	50.82
CDY55767	Canola	cytosol	52.53	50.82
Bra005901.1-P	Field mustard	cytosol	52.25	50.54
AT5G06610.1	Thale cress	cytosol	51.69	50.0
Os10t0411100-00	Rice	cytosol, peroxisome, plasma membrane	62.08	49.33
GSMUA_Achr9P25120_001	Banana	mitochondrion	41.01	43.32
GSMUA_Achr3P02230_001	Banana	cytosol, plastid	36.8	42.67
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	38.76	42.2
GSMUA_Achr6P24020_001	Banana	cytosol	43.82	38.9
GSMUA_Achr4P14230_001	Banana	cytosol, mitochondrion, nucleus, peroxisome	48.88	37.99
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	40.17	37.73
GSMUA_Achr10P...	Banana	cytosol	40.45	37.02
GSMUA_Achr4P32590_001	Banana	cytosol	46.63	36.73
GSMUA_Achr4P27870_001	Banana	cytosol	39.04	36.58
GSMUA_Achr6P16820_001	Banana	cytosol	45.22	36.51
GSMUA_Achr2P13560_001	Banana	cytosol	37.92	35.81
GSMUA_Achr10P...	Banana	plastid	41.85	35.56
GSMUA_Achr7P00620_001	Banana	mitochondrion	40.45	35.38
GSMUA_Achr5P28960_001	Banana	cytosol	42.13	34.4
GSMUA_Achr7P26350_001	Banana	cytosol, mitochondrion, peroxisome, plastid	46.07	34.17
GSMUA_Achr2P13470_001	Banana	cytosol	41.29	33.49
GSMUA_Achr2P21540_001	Banana	plastid	40.45	32.95
VIT_08s0007g07110.t01	Wine grape	cytosol	58.43	31.52
GSMUA_Achr6P33890_001	Banana	cytosol	33.71	31.33

Protein Annotations

EnsemblPlants:GSMUA_Achr3P29550_001	EnsemblPlants:GSMUA_Achr3T29550_001	EnsemblPlantsGene:GSMUA_Achr3G29550_001	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF3
PFAM:PF04788	SEG:seg	UniParc:UPI000295C0D2	UniProt:M0SIX1	MapMan:27.4.5.3	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G29550_001]

Coordinates

chr3:-:28651109..28652793

Molecular Weight (calculated)

39853.8 Da

IEP (calculated)

8.109

GRAVY (calculated)

-0.266

Length

356 amino acids

Sequence
(BLAST)

001: MARLAPLSEE PISEEESRST ARRIHSFHNW IKSHLPMLSN KRNDLKILLS VLGCPLSPLS VSPKQPRDVA SSAQYIIQQF RATTGCSKRE RTAKSMYASG
101: RVRMEMAQEH GVSSSGSASK GHHKGCFVVW QMVPDMWLVE FAVSGHQIAA GSDGKVAWRR TPWLGAHAAR GGVRPLRRAL QAIRQGLDPE TIAAVFSPAQ
201: HIGEKHIGDE ECFVLELVVD DSVLSSWSDS TAEIIKHRML GFFSQRSGLL VRLEDSQLTR IQSPGAEAMY WETTMVSCME DYRRVDGLMI AHSGRSVANL
301: LRFGLGVREH RVSTQMEERW TIDDVLFNVP GLAADCFIPP EEVRRSCFYD IAIRDH

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.