Factsheet for TraesCS4B01G282900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G281900.1	Wheat	cytosol	98.9	98.9
TraesCS4A01G020600.1	Wheat	cytosol	98.9	98.37
Zm00001d027816_P001	Maize	cytosol	87.12	88.09
EER95445	Sorghum	cytosol	87.67	87.19
Os03t0167400-00	Rice	cytosol	86.85	86.61
GSMUA_Achr3P29550_001	Banana	cytosol	61.1	62.64
KRG96347	Soybean	cytosol	49.04	50.71
KRH68081	Soybean	cytosol	49.04	50.14
Solyc03g051920.2.1	Tomato	cytosol	47.67	49.29
PGSC0003DMT400066079	Potato	cytosol	47.4	49.15
KRH71794	Soybean	cytosol	48.22	48.62
KRH38019	Soybean	peroxisome	46.85	47.37
CDY55767	Canola	cytosol	46.3	45.92
CDX81011	Canola	cytosol	46.3	45.92
Bra005901.1-P	Field mustard	cytosol	46.03	45.65
AT5G06610.1	Thale cress	cytosol	45.48	45.11
TraesCS5B01G078600.2	Wheat	cytosol	44.93	38.14
TraesCS4B01G077800.1	Wheat	cytosol	47.4	37.86
TraesCS2B01G211900.1	Wheat	nucleus	47.4	33.99
TraesCS1B01G151200.1	Wheat	nucleus	41.92	32.76
TraesCS3B01G333900.1	Wheat	cytosol	33.97	32.21
TraesCS4B01G211300.1	Wheat	cytosol, nucleus, plastid	38.36	31.39
VIT_08s0007g07110.t01	Wine grape	cytosol	50.68	28.03

Protein Annotations

EnsemblPlants:TraesCS4B01G282900.1	EnsemblPlantsGene:TraesCS4B01G282900	InterPro:DUF620	PANTHER:PTHR31300	PANTHER:PTHR31300:SF3	PFAM:PF04788
SEG:seg	MapMan:27.4.5.3	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:566235511..566238968

Molecular Weight (calculated)

38715.2 Da

IEP (calculated)

8.355

GRAVY (calculated)

-0.107

Length

365 amino acids

Sequence
(BLAST)

001: MRARVALEPL AEEPGAEDES GARRRSGLQA TLHRWARILS GGAAGDDARP AADLRVLLSV LACPLSPVPI LPRLPRHVAS SAQYIIEQFR ATTGCGKLEG
101: TAKSMYAAGK VRLAMLQEPA GAGHANGNAG RCHEGSFVVW QLAPGMWLVE MAVAGHSVAA GSDGRVAWRR TPWLGAHAAR GGSRPLRRAL QGLDPVMIAS
201: IFSTAEHAGE KQVDGEDCFV LRLDVGPSTL SSWSDGTAEV IRHGLTGFFS QRSGLLARLE DSQLTRIQSP GAAAMYWETT IASTLADYRP VDGGVTVAHA
301: GRSTAHLARF GVGVRAARVV TRMEESWTID DVAFDVPGLG PDAFIPPEEV RRSRLYDAMA AGGGK

Best Arabidopsis Sequence Match ( AT5G06610.1 )
(BLAST)

001: MQRLAPLMEE PIDEEDQEEE RGGRKGSTRS KSWKKWIKTQ LQFIVFPKKP DMKLLLSVMG CPLFPVPPLS KISLQQVSSS AQYIIQQFAA ATGCKKLAGE
101: IKNTFVTGKI TMTMVSDINS STAVSSASSV SHKGCFVMWQ MLPEKWLIEL VGGGHKVSAG SDGEITWRYT PWLGDHAAKG AIRPLRRALQ GLDPLTISSV
201: FSSAQFVGEK EINGKDCFIL KLSTDQIDLS KRSDSTAEMI KHVAFGYFSQ KSGLLICLED SSLTRIQIPG TVPTYWETSM SSWMEDYRAI EGSEVVIAHS
301: GKTDVLISRF GETLKGGISV TRMEEKWTID DVAFDVPGLS VDCFIPPKEM KMDFHHQDAQ KHLPNYNT

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FG09]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.