CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76791	Soybean	cytosol	92.59	93.58
AT5G66740.1	Thale cress	cytosol	73.81	75.41
Bra012096.1-P	Field mustard	cytosol	72.49	74.25
CDY53851	Canola	cytosol	72.49	74.25
Bra023074.1-P	Field mustard	plastid	66.67	74.12
CDY30758	Canola	cytosol	72.22	73.98
CDY49838	Canola	cytosol	71.69	73.44
CDY52160	Canola	cytosol	71.69	73.44
VIT_04s0023g01510.t01	Wine grape	cytosol	69.05	71.9
PGSC0003DMT400038589	Potato	cytosol, nucleus, peroxisome	67.99	68.9
Solyc02g085490.1.1	Tomato	cytosol, nucleus, peroxisome	67.99	68.9
GSMUA_Achr4P27870_001	Banana	cytosol	58.73	58.42
GSMUA_Achr2P13560_001	Banana	cytosol	56.08	56.23
KRH51867	Soybean	cytosol	56.08	55.5
KRH50361	Soybean	cytosol	55.82	55.24
Zm00001d012676_P001	Maize	cytosol	52.91	52.36
KRH05801	Soybean	cytosol	52.65	51.69
TraesCS3A01G302500.1	Wheat	cytosol	52.38	51.56
OQU89854	Sorghum	cytosol	52.12	51.3
EES03659	Sorghum	cytosol	52.12	51.3
TraesCS3B01G333900.1	Wheat	cytosol	52.12	51.17
TraesCS3D01G299300.1	Wheat	cytosol	51.85	51.04
Zm00001d043364_P001	Maize	mitochondrion	15.61	48.76
HORVU3Hr1G073950.2	Barley	plastid	52.91	46.3
KRH73113	Soybean	cytosol	49.74	44.34
KRH15018	Soybean	cytosol	49.47	43.79
KRG97798	Soybean	cytosol	50.0	43.05
KRH31070	Soybean	cytosol	49.47	42.89
Bra031821.1-P	Field mustard	cytosol	70.9	35.78
KRH43665	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	35.45	34.81
KRH71794	Soybean	cytosol	33.07	34.53
KRH68081	Soybean	cytosol	32.54	34.45
KRH13789	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	34.92	34.38
KRG96347	Soybean	cytosol	32.01	34.28
KRH38019	Soybean	peroxisome	32.28	33.8
KRG91072	Soybean	plastid	41.27	33.69
KRH35700	Soybean	plastid	41.01	33.55
KRH05611	Soybean	plastid	40.48	32.14
KRH15430	Soybean	plastid	40.21	32.14

Protein Annotations

EMBL:ACUP02006760	EnsemblPlants:KRH28651	EnsemblPlantsGene:GLYMA_11G066700	EntrezGene:102664990	InterPro:DUF620	PANTHER:PTHR31300
PANTHER:PTHR31300:SF9	PFAM:PF04788	ProteinID:KRH28651	ProteinID:KRH28651.1	UniParc:UPI00023CBBC1	UniProt:I1LHQ4
MapMan:27.4.5.3	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:5007407..5009718

Molecular Weight (calculated)

42652.9 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.352

Length

378 amino acids

Sequence
(BLAST)

001: MKQPAAKSSL RRLCPNINKE DGLETVLEIP IPEEMFSTMG NNVALRWQNM LTWMKAQTED KLATPTVASR LNELRFLLYL VGCPLIPLQV QLGHSVHRPV
101: RDCSIEASTA KYIVQQYIAA TGGQPALNAV DSMCVTGQIK ISASDFYHTG QSIEVKKTSE EMGGFVLWQK DPDLWCLEVV LSGCKVCCGS NGKVSWRHSS
201: NQQTPVQRGA PRPLRRFLQG LDPRATANLF LDAACIGEKI INDEECFILK LETSPAIRDA QSGPNFEIIH HTIWGYFSQR SGLLVQFEDC RLHSMRTKDD
301: NDIFWQTSLE SVIEDYKYVD GINVSHSGKT RVTVSRYGEQ SANHKKELEE RWKIEEVDFN IWGLNAESFL PPSNLEKT

Best Arabidopsis Sequence Match ( AT5G66740.1 )
(BLAST)

001: MRKLCPNIDK DDGLETVLEV PIPEEMFSGM GNNVALRWQN MMTWMKAQTS DKWSQPLIAA RINELRFLLY LVGSPLIPLQ VQVGHSVHKP VKDCSIQAST
101: AKYIVQQYIA ATGGPQALNA VNSMCVTGQV KMTASEFHQG DDSGVNLKSN DEMGGFVLWQ KDPDLWCLEL VVSGCKVICG SNGRLSWRHS SNQQTPASTG
201: TPRPLRRFLQ GLDPRSTANL FLDATCIGEK IINGEDCFIL KLETSPAVRE AQSGPNFEII HHTIWGYFSQ RSGLLIQFED SRLLRMRTKE DEDVFWETSA
301: ESVMDDYRYV DNVNIAHGGK TSVTVFRYGE ASANHRRQMT EKWRIEEVDF NVWGLSVDHF LPPANLQIEK

Arabidopsis Description

Protein of unknown function (DUF620) [Source:TAIR;Acc:AT5G66740]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.