Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
VIT_17s0000g07890.t01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G79420.1 | VIT_17s0000g07890.t01 | AT5G62880.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH13789 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 79.64 | 80.47 |
KRH43665 | Soybean | mitochondrion, peroxisome, plasma membrane, plastid | 79.38 | 80.0 |
AT1G79420.1 | Thale cress | mitochondrion | 70.88 | 65.95 |
CDX87382 | Canola | mitochondrion | 70.1 | 65.23 |
CDX88540 | Canola | mitochondrion | 70.1 | 65.23 |
CDX79318 | Canola | cytosol | 14.43 | 65.12 |
Bra035117.1-P | Field mustard | mitochondrion | 69.85 | 64.99 |
GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 52.06 | 61.77 |
GSMUA_Achr9P25120_001 | Banana | mitochondrion | 53.09 | 61.13 |
VIT_03s0091g00410.t01 | Wine grape | plastid | 53.35 | 43.58 |
VIT_18s0001g09450.t01 | Wine grape | plastid | 51.8 | 42.86 |
VIT_04s0023g01510.t01 | Wine grape | cytosol | 38.14 | 40.77 |
VIT_18s0001g12320.t01 | Wine grape | cytosol | 36.08 | 37.63 |
VIT_13s0019g03180.t01 | Wine grape | cytosol | 40.46 | 36.85 |
VIT_08s0007g07110.t01 | Wine grape | cytosol | 43.81 | 25.76 |
Protein Annotations
EntrezGene:100246643 | wikigene:100246643 | MapMan:27.4.5.3 | ProteinID:CCB48977 | ProteinID:CCB48977.1 | InterPro:DUF620 |
UniProt:F6H9T4 | EMBL:FN595503 | EntrezGene:LOC100246643 | wikigene:LOC100246643 | PFAM:PF04788 | PANTHER:PTHR31300 |
PANTHER:PTHR31300:SF8 | UniParc:UPI00015CCED6 | ArrayExpress:VIT_19s0085g00900 | EnsemblPlantsGene:VIT_19s0085g00900 | EnsemblPlants:VIT_19s0085g00900.t01 | RefSeq:XP_002265161 |
RefSeq:XP_002265161.1 | RefSeq:XP_010645089.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr19:-:23399248..23401502
Molecular Weight (calculated)
43243.2 Da
IEP (calculated)
7.477
GRAVY (calculated)
-0.237
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRARKKQQ RWCTQPLTPL MEGPDPEMQE EGTKKESSWE VIREWFRLQK GGGLGVHGSS SFSLSLYGNI PSKTQDLRLL LGVLGCPLAP IPLATDPLHR
101: LHIKDIPIET SSACYIIQQY LAATGCLKQE KGMKNMYTTG TMKMICCETE ISTGKSVKSL GTRSGENGCF VLWQMSPGMW SLELVVGCNK VVAGSNGKIV
201: WRHTPWLGTH AAKGPHRPLR RIIQGLDPKS TASLFAKAQC LGEKRIGEDD CFVLKVAADR AAVMERNEGP AEVIRHVLYG YFSQKSGLLI YLEDSHLTRV
301: QAPGNDTVYW ETTIGTSLWD YRDVDGVMIA HEGRTIATVF RFGEVSMQHS RTRMEELWVI DDVVFNVPGL SFDYFIPPAD IFDVDNSP
101: LHIKDIPIET SSACYIIQQY LAATGCLKQE KGMKNMYTTG TMKMICCETE ISTGKSVKSL GTRSGENGCF VLWQMSPGMW SLELVVGCNK VVAGSNGKIV
201: WRHTPWLGTH AAKGPHRPLR RIIQGLDPKS TASLFAKAQC LGEKRIGEDD CFVLKVAADR AAVMERNEGP AEVIRHVLYG YFSQKSGLLI YLEDSHLTRV
301: QAPGNDTVYW ETTIGTSLWD YRDVDGVMIA HEGRTIATVF RFGEVSMQHS RTRMEELWVI DDVVFNVPGL SFDYFIPPAD IFDVDNSP
001: MSNSKSYWRK QRWGTPPQAL TPLMEGPDPD MQDERTKKES SWEAIREWFK VHKGISGNMS SPSVQPLCNS YDVPAKGQDL RLLLGVLGCP LAPISVVVSD
101: LFPDDPLLGS FQIKNVPFET STAHYIIQQY LAATGCLKRA KAAKNMYATG IMKMSCCETE IAAGKSVKTL GGGGNGRSGD SGCFVLWQMQ PGMWSLELVL
201: GGTKLISGSD GKTVWRHTPW LGTHAAKGPQ RPLRRLIQGL DPKTTASLFA KAQCLGERRI GDDDCFVLKV SADRDSLLER NDAGAPAEVI RHALYGYFCQ
301: KSGLLVYLED SHLTRVMTIS PEDEAVYWET TIGTSIGDYR DVDGVAVAHC GRAVATVFRF GETSLQYSRT RMEEIWRIDD VVFDVPGLSL DSFIPPADIF
401: EDTNPNNNNI YSIVNSR
101: LFPDDPLLGS FQIKNVPFET STAHYIIQQY LAATGCLKRA KAAKNMYATG IMKMSCCETE IAAGKSVKTL GGGGNGRSGD SGCFVLWQMQ PGMWSLELVL
201: GGTKLISGSD GKTVWRHTPW LGTHAAKGPQ RPLRRLIQGL DPKTTASLFA KAQCLGERRI GDDDCFVLKV SADRDSLLER NDAGAPAEVI RHALYGYFCQ
301: KSGLLVYLED SHLTRVMTIS PEDEAVYWET TIGTSIGDYR DVDGVAVAHC GRAVATVFRF GETSLQYSRT RMEEIWRIDD VVFDVPGLSL DSFIPPADIF
401: EDTNPNNNNI YSIVNSR
Arabidopsis Description
At1g79420/T8K14_16 [Source:UniProtKB/TrEMBL;Acc:Q940T0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.