Skip to main content
crop-pal logo
Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_17s0000g07890.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G79420.1 VIT_17s0000g07890.t01 AT5G62880.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH13789 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 79.64 80.47
KRH43665 Soybean mitochondrion, peroxisome, plasma membrane, plastid 79.38 80.0
AT1G79420.1 Thale cress mitochondrion 70.88 65.95
CDX87382 Canola mitochondrion 70.1 65.23
CDX88540 Canola mitochondrion 70.1 65.23
CDX79318 Canola cytosol 14.43 65.12
Bra035117.1-P Field mustard mitochondrion 69.85 64.99
GSMUA_Achr10P... Banana cytosol, nucleus, plastid 52.06 61.77
GSMUA_Achr9P25120_001 Banana mitochondrion 53.09 61.13
VIT_03s0091g00410.t01 Wine grape plastid 53.35 43.58
VIT_18s0001g09450.t01 Wine grape plastid 51.8 42.86
VIT_04s0023g01510.t01 Wine grape cytosol 38.14 40.77
VIT_18s0001g12320.t01 Wine grape cytosol 36.08 37.63
VIT_13s0019g03180.t01 Wine grape cytosol 40.46 36.85
VIT_08s0007g07110.t01 Wine grape cytosol 43.81 25.76
Protein Annotations
EntrezGene:100246643wikigene:100246643MapMan:27.4.5.3ProteinID:CCB48977ProteinID:CCB48977.1InterPro:DUF620
UniProt:F6H9T4EMBL:FN595503EntrezGene:LOC100246643wikigene:LOC100246643PFAM:PF04788PANTHER:PTHR31300
PANTHER:PTHR31300:SF8UniParc:UPI00015CCED6ArrayExpress:VIT_19s0085g00900EnsemblPlantsGene:VIT_19s0085g00900EnsemblPlants:VIT_19s0085g00900.t01RefSeq:XP_002265161
RefSeq:XP_002265161.1RefSeq:XP_010645089.1SEG:seg:::
Description
No Description!
Coordinates
chr19:-:23399248..23401502
Molecular Weight (calculated)
43243.2 Da
IEP (calculated)
7.477
GRAVY (calculated)
-0.237
Length
388 amino acids
Sequence
(BLAST)
001: MASRARKKQQ RWCTQPLTPL MEGPDPEMQE EGTKKESSWE VIREWFRLQK GGGLGVHGSS SFSLSLYGNI PSKTQDLRLL LGVLGCPLAP IPLATDPLHR
101: LHIKDIPIET SSACYIIQQY LAATGCLKQE KGMKNMYTTG TMKMICCETE ISTGKSVKSL GTRSGENGCF VLWQMSPGMW SLELVVGCNK VVAGSNGKIV
201: WRHTPWLGTH AAKGPHRPLR RIIQGLDPKS TASLFAKAQC LGEKRIGEDD CFVLKVAADR AAVMERNEGP AEVIRHVLYG YFSQKSGLLI YLEDSHLTRV
301: QAPGNDTVYW ETTIGTSLWD YRDVDGVMIA HEGRTIATVF RFGEVSMQHS RTRMEELWVI DDVVFNVPGL SFDYFIPPAD IFDVDNSP
Best Arabidopsis Sequence Match ( AT1G79420.1 )
(BLAST)
001: MSNSKSYWRK QRWGTPPQAL TPLMEGPDPD MQDERTKKES SWEAIREWFK VHKGISGNMS SPSVQPLCNS YDVPAKGQDL RLLLGVLGCP LAPISVVVSD
101: LFPDDPLLGS FQIKNVPFET STAHYIIQQY LAATGCLKRA KAAKNMYATG IMKMSCCETE IAAGKSVKTL GGGGNGRSGD SGCFVLWQMQ PGMWSLELVL
201: GGTKLISGSD GKTVWRHTPW LGTHAAKGPQ RPLRRLIQGL DPKTTASLFA KAQCLGERRI GDDDCFVLKV SADRDSLLER NDAGAPAEVI RHALYGYFCQ
301: KSGLLVYLED SHLTRVMTIS PEDEAVYWET TIGTSIGDYR DVDGVAVAHC GRAVATVFRF GETSLQYSRT RMEEIWRIDD VVFDVPGLSL DSFIPPADIF
401: EDTNPNNNNI YSIVNSR
Arabidopsis Description
At1g79420/T8K14_16 [Source:UniProtKB/TrEMBL;Acc:Q940T0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.