Factsheet for HORVU5Hr1G075810.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

mitochondrion 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G282300.1	Wheat	cytosol, mitochondrion, nucleus	82.11	79.59
TraesCS5A01G283800.1	Wheat	mitochondrion, nucleus, peroxisome	78.95	78.95
TraesCS5D01G291000.1	Wheat	cytosol, mitochondrion, nucleus	74.74	71.0
Zm00001d021038_P001	Maize	nucleus	57.37	59.24
Zm00001d006078_P001	Maize	nucleus	54.21	53.65
OQU89743	Sorghum	mitochondrion, nucleus, plastid	57.37	52.4
Os09t0505000-00	Rice	nucleus	54.21	48.13
HORVU7Hr1G053470.4	Barley	cytosol, mitochondrion, plastid	41.58	29.37
HORVU1Hr1G049430.2	Barley	cytosol, nucleus, plastid	27.37	29.21
HORVU4Hr1G069780.1	Barley	nucleus	25.79	29.17
HORVU5Hr1G123180.1	Barley	cytosol, nucleus	27.89	27.89
GSMUA_Achr5P25250_001	Banana	cytosol	37.89	26.67
PGSC0003DMT400003096	Potato	nucleus	27.37	26.0
Solyc06g007880.1.1	Tomato	nucleus	24.74	25.27
Bra015092.1-P	Field mustard	nucleus	26.84	24.64
AT3G25030.4	Thale cress	cytosol	31.58	24.0
AT4G13100.2	Thale cress	extracellular	33.16	23.77
CDY69745	Canola	cytosol	30.0	23.27
HORVU3Hr1G093580.1	Barley	plastid	33.68	23.1
CDX77379	Canola	cytosol	29.47	22.4
CDY24647	Canola	nucleus	24.21	21.6
Bra029623.1-P	Field mustard	nucleus	23.68	21.03
Bra001236.1-P	Field mustard	nucleus	24.21	20.81
CDY05318	Canola	nucleus	23.16	20.75
KRH07558	Soybean	nucleus	26.84	19.47
KRH66042	Soybean	nucleus	27.89	19.41
VIT_00s0186g00090.t01	Wine grape	cytosol, nucleus, plastid	31.05	18.1
CDX74062	Canola	cytosol, nucleus, plastid	27.89	15.68
Bra040362.1-P	Field mustard	nucleus	28.42	15.61
AT3G07120.1	Thale cress	nucleus	27.89	14.72
HORVU3Hr1G064710.1	Barley	cytosol	19.47	10.79

Protein Annotations

EnsemblPlants:HORVU5Hr1G075810.1	EnsemblPlantsGene:HORVU5Hr1G075810	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	PANTHER:PTHR12183	PANTHER:PTHR12183:SF21	PFAM:PF13920	PFscan:PS50089
ScanProsite:PS00518	SEG:seg	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI000B4669D2	UniProt:A0A287RUI5
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:547906481..547908226

Molecular Weight (calculated)

19926.6 Da

IEP (calculated)

8.416

GRAVY (calculated)

-0.428

Length

190 amino acids

Sequence
(BLAST)

001: MEGAARVVPS RRGGVTLAEQ LAASSNLRDL LKLRDDDGQG DGARPARRRT LLDVIRGPED DAAPPPAPPS STEPAAGAAV PGTASPGQGE ERRVSLMALL
101: EQAERQWTTA AARAGAWTRV DQHAAAEQEE EGSGGKGVGG RCCVCMARRK GAAFVPCGHT FCRACAREVR AGRGRCPLCN ATIRDVLNLF

Best Arabidopsis Sequence Match ( AT3G25030.3 )
(BLAST)

001: MIQMDGGDRL RVTLLDRMST VESSRSCLTL EAILMADKNR TSPQILSPPP SRSQSNRSLV EVMQREHRHS RDKTAWKSLR EKLRLKQEAS SVEGRIRLGA
101: VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN
201: TTILEVLDLF

Arabidopsis Description

At3g25030 [Source:UniProtKB/TrEMBL;Acc:Q9LJR9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.