Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003096 | Potato | nucleus | 79.57 | 74.0 |
| GSMUA_Achr8P08650_001 | Banana | nucleus | 25.27 | 49.47 |
| Solyc09g059990.1.1 | Tomato | nucleus | 36.56 | 27.53 |
| Zm00001d021038_P001 | Maize | nucleus | 26.88 | 27.17 |
| HORVU1Hr1G049430.2 | Barley | cytosol, nucleus, plastid | 25.81 | 26.97 |
| HORVU4Hr1G069780.1 | Barley | nucleus | 24.19 | 26.79 |
| HORVU5Hr1G123180.1 | Barley | cytosol, nucleus | 26.88 | 26.32 |
| TraesCS5A01G283800.1 | Wheat | mitochondrion, nucleus, peroxisome | 26.34 | 25.79 |
| TraesCS5D01G291000.1 | Wheat | cytosol, mitochondrion, nucleus | 26.88 | 25.0 |
| HORVU5Hr1G075810.1 | Barley | mitochondrion, nucleus | 25.27 | 24.74 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 31.18 | 24.68 |
| TraesCS5B01G282300.1 | Wheat | cytosol, mitochondrion, nucleus | 25.81 | 24.49 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.95 | 24.44 |
| OQU89743 | Sorghum | mitochondrion, nucleus, plastid | 26.88 | 24.04 |
| GSMUA_Achr8P00880_001 | Banana | nucleus | 34.41 | 23.97 |
| GSMUA_Achr5P25250_001 | Banana | cytosol | 33.33 | 22.96 |
| TraesCS3D01G419000.1 | Wheat | cytosol, mitochondrion, nucleus | 30.65 | 22.89 |
| KRH07558 | Soybean | nucleus | 31.72 | 22.52 |
| Zm00001d006078_P001 | Maize | nucleus | 23.12 | 22.4 |
| KRH66042 | Soybean | nucleus | 32.26 | 21.98 |
| TraesCS3A01G423800.1 | Wheat | cytosol | 29.57 | 21.57 |
| EES04107 | Sorghum | nucleus | 33.87 | 21.43 |
| TraesCS7A01G257600.1 | Wheat | nucleus | 30.11 | 21.13 |
| Zm00001d042359_P001 | Maize | cytosol, mitochondrion, nucleus | 34.41 | 20.91 |
| Zm00001d031586_P001 | Maize | cytosol | 27.96 | 20.8 |
| TraesCS3B01G459700.1 | Wheat | cytosol, mitochondrion, nucleus | 27.96 | 20.63 |
| TraesCS7B01G154600.1 | Wheat | nucleus | 29.03 | 20.53 |
| Zm00001d012045_P001 | Maize | cytosol, mitochondrion, nucleus | 32.8 | 20.4 |
| TraesCS7D01G258600.1 | Wheat | nucleus | 29.03 | 20.38 |
| HORVU7Hr1G053470.4 | Barley | cytosol, mitochondrion, plastid | 28.49 | 19.7 |
| Os09t0505000-00 | Rice | nucleus | 22.58 | 19.63 |
| Os01t0917900-01 | Rice | nucleus | 32.26 | 19.17 |
| HORVU3Hr1G093580.1 | Barley | plastid | 27.42 | 18.41 |
| TraesCS3D01G259900.1 | Wheat | nucleus | 19.35 | 13.28 |
| TraesCS3A01G259800.1 | Wheat | nucleus | 18.82 | 12.82 |
| OQU80845 | Sorghum | mitochondrion | 30.11 | 11.69 |
| HORVU3Hr1G064710.1 | Barley | cytosol | 19.35 | 10.5 |
| Solyc02g081180.1.1 | Tomato | nucleus | 11.29 | 10.34 |
| Solyc07g049400.1.1 | Tomato | mitochondrion | 8.06 | 8.82 |
| Solyc03g031830.1.1 | Tomato | nucleus | 10.75 | 8.16 |
Protein Annotations
| EnsemblPlants:Solyc06g007880.1.1 | EnsemblPlantsGene:Solyc06g007880.1 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF20 | PFAM:PF13920 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0002766333 | UniProt:K4C3G8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6:-:1779132..1779692
Molecular Weight (calculated)
20661.6 Da
IEP (calculated)
4.101
GRAVY (calculated)
-0.765
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSISTTPVP ASDIPINQGN NRSINRRLST RFPSSKDATY PEDIVNEFGS TNRSLNRNAS RAQRGSPSTK YDPSMSMRRS GTDGECEDEE SEEEEEEPVR
101: MSLMALLAES EGSSYMMGED EDEDEDEDDG GGDHLNNCCV CQVRHKGAAF VPCGHSFCRL CSRELWVEGA NCPLCNNFIL EILDIF
101: MSLMALLAES EGSSYMMGED EDEDEDEDDG GGDHLNNCCV CQVRHKGAAF VPCGHSFCRL CSRELWVEGA NCPLCNNFIL EILDIF
001: MIQMDGGDRL RVTLLDRMST VESSRSCLTL EAILMADKNR TSPQILSPPP SRSQSNRSLV EVMQREHRHS RDKTAWKSLR EKLRLKQEAS SVEGRIRLGA
101: VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN
201: TTILEVLDLF
101: VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN
201: TTILEVLDLF
Arabidopsis Description
At3g25030 [Source:UniProtKB/TrEMBL;Acc:Q9LJR9]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.