Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66042 | Soybean | nucleus | 74.43 | 71.43 |
| GSMUA_Achr8P08650_001 | Banana | nucleus | 20.61 | 56.84 |
| Solyc06g007880.1.1 | Tomato | nucleus | 22.52 | 31.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.06 | 31.58 |
| HORVU4Hr1G069780.1 | Barley | nucleus | 19.85 | 30.95 |
| HORVU1Hr1G049430.2 | Barley | cytosol, nucleus, plastid | 20.61 | 30.34 |
| HORVU5Hr1G123180.1 | Barley | cytosol, nucleus | 21.76 | 30.0 |
| Zm00001d021038_P001 | Maize | nucleus | 20.61 | 29.35 |
| Zm00001d006078_P001 | Maize | nucleus | 21.37 | 29.17 |
| KRH46683 | Soybean | nucleus | 39.31 | 29.01 |
| GSMUA_Achr8P00880_001 | Banana | nucleus | 29.39 | 28.84 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 25.57 | 28.51 |
| KRG99707 | Soybean | nucleus | 38.55 | 28.29 |
| TraesCS5B01G282300.1 | Wheat | cytosol, mitochondrion, nucleus | 20.23 | 27.04 |
| PGSC0003DMT400003096 | Potato | nucleus | 20.61 | 27.0 |
| HORVU5Hr1G075810.1 | Barley | mitochondrion, nucleus | 19.47 | 26.84 |
| GSMUA_Achr5P25250_001 | Banana | cytosol | 27.48 | 26.67 |
| TraesCS3D01G419000.1 | Wheat | cytosol, mitochondrion, nucleus | 25.19 | 26.51 |
| TraesCS5A01G283800.1 | Wheat | mitochondrion, nucleus, peroxisome | 19.08 | 26.32 |
| TraesCS5D01G291000.1 | Wheat | cytosol, mitochondrion, nucleus | 19.85 | 26.0 |
| OQU89743 | Sorghum | mitochondrion, nucleus, plastid | 20.61 | 25.96 |
| TraesCS3B01G459700.1 | Wheat | cytosol, mitochondrion, nucleus | 24.81 | 25.79 |
| HORVU3Hr1G093580.1 | Barley | plastid | 26.34 | 24.91 |
| TraesCS3A01G423800.1 | Wheat | cytosol | 24.05 | 24.71 |
| Os09t0505000-00 | Rice | nucleus | 19.47 | 23.83 |
| TraesCS7B01G154600.1 | Wheat | nucleus | 22.9 | 22.81 |
| Zm00001d012045_P001 | Maize | cytosol, mitochondrion, nucleus | 25.95 | 22.74 |
| TraesCS7A01G257600.1 | Wheat | nucleus | 22.9 | 22.64 |
| TraesCS7D01G258600.1 | Wheat | nucleus | 22.52 | 22.26 |
| HORVU7Hr1G053470.4 | Barley | cytosol, mitochondrion, plastid | 22.52 | 21.93 |
| Zm00001d042359_P001 | Maize | cytosol, mitochondrion, nucleus | 25.57 | 21.9 |
| EES04107 | Sorghum | nucleus | 24.43 | 21.77 |
| Zm00001d031586_P001 | Maize | cytosol | 20.61 | 21.6 |
| Os01t0917900-01 | Rice | nucleus | 25.19 | 21.09 |
| TraesCS3D01G259900.1 | Wheat | nucleus | 16.41 | 15.87 |
| TraesCS3A01G259800.1 | Wheat | nucleus | 16.41 | 15.75 |
| OQU80845 | Sorghum | mitochondrion | 25.19 | 13.78 |
| KRH36518 | Soybean | mitochondrion | 9.54 | 12.76 |
| KRH02010 | Soybean | cytosol | 9.54 | 12.63 |
| KRH51146 | Soybean | cytosol | 9.54 | 12.08 |
| KRH11501 | Soybean | cytosol, mitochondrion, nucleus, plastid | 9.16 | 11.48 |
| HORVU3Hr1G064710.1 | Barley | cytosol | 14.89 | 11.37 |
Protein Annotations
| EntrezGene:100819018 | Gene3D:3.30.40.10 | MapMan:35.2 | EMBL:ACUP02010030 | EnsemblPlantsGene:GLYMA_16G094800 | UniProt:I1MME7 |
| InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlants:KRH07558 | ProteinID:KRH07558 | ProteinID:KRH07558.1 | PFAM:PF13920 |
| PFscan:PS50089 | PANTHER:PTHR12183 | PANTHER:PTHR12183:SF20 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000233B1CC |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr16:+:16584149..16585629
Molecular Weight (calculated)
29128.7 Da
IEP (calculated)
4.338
GRAVY (calculated)
-0.647
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGRRRITL YDQMTAGNSC SSGSRDSLAS LMMDDVVFKK METEASGELS RSRTLQDIIR EEKPNNSSNA TDRNSWKAFK EKLWLKRAIG SAWSSATTIT
101: NHSNDDRNLP NLPETRHDSD ELTQQNDVVA GEANDSEPIA RFGSPVEQVA AGGDSSDGEN NHEAVVGVSL MDLLEEAEQE MDLYRVSDDD DVAEYEKREG
201: EGEEEKGGVV EYNCCVCMVR HKGAAFIPCG HTFCRMCSRE IWVSRGNCPL CNNLILEILD IF
101: NHSNDDRNLP NLPETRHDSD ELTQQNDVVA GEANDSEPIA RFGSPVEQVA AGGDSSDGEN NHEAVVGVSL MDLLEEAEQE MDLYRVSDDD DVAEYEKREG
201: EGEEEKGGVV EYNCCVCMVR HKGAAFIPCG HTFCRMCSRE IWVSRGNCPL CNNLILEILD IF
001: MIQMDGGDRL RVTLLDRMST VESSRSCLTL EAILMADKNR TSPQILSPPP SRSQSNRSLV EVMQREHRHS RDKTAWKSLR EKLRLKRNGS VWISSNSIPS
101: LDTPIPNRDN VSHQLGFLLS NSGNVTEEAS SVEGRIRLGA VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI
201: SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN TTILEVLDLF
101: LDTPIPNRDN VSHQLGFLLS NSGNVTEEAS SVEGRIRLGA VLAEERALSA REEETPAERE VEPARMSLME LLEENEGQMS FVSVDGEAEE EVAAVTAAEI
201: SCCVCMVRSK GAAFIPCGHT FCRLCSRELW VQRGNCPLCN TTILEVLDLF
Arabidopsis Description
At3g25030 [Source:UniProtKB/TrEMBL;Acc:Q9LJR9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.